Short Communication: Immunity Gene pedB Enhances Production of Pediocin PA-1 in Naturally Resistant Lactococcus lactis Strains
Article Outline
Abstract
Heterologous production of the antilisterial bacteriocin pediocin PA-1 in lactococci is an attractive objective to increase the safety of dairy products. In a previous paper, we developed a system for the heterologous production of the bacteriocin pediocin PA-1 in pediocin-resistant lactococcal hosts through a leader exchange strategy. The system was based on 3 genes, 1 encoding the fusion between the lactococcin A leader and propediocin PA-1, and the other 2 encoding the lactococcin A secretion machinery. In this study, we investigated whether the addition of the pediocin PA-1 immunity gene (pedB) to this system has any effect on pediocin production. Introduction of the plasmid(s) carrying the genes described above into nisinproducing and non-nisinproducing lactococcal hosts led to a significant increase in the production of pediocin compared with the equivalent pedB-devoid systems. In addition, we obtained a nisin-producing strain with the ability to secrete pediocin PA-1 at a level equivalent to that of the parental strain Pediococcus acidilactici 347, which represents a notable improvement over our previous systems.
Keywords: Lactococcus lactis, bacteriocin, immunity, heterologous production
Pediocin PA-1 is a bacteriocin with a broad inhibitory spectrum that is particularly effective against Listeria monocytogenes, a foodborne pathogen of major concern to the dairy industry (Rodríguez et al., 2002). The significant amino acid homologies shared by leader peptides and by dedicated transporters of class II bacteriocins (Havarstein et al., 1995) is the basis of an attractive approach for the heterologous production of pediocin PA-1 by lactococci (Van Belkum et al., 1997; Horn et al., 1999), which may be used as a dairy starter, adjunct, or bioprotective culture in the future. The activity of pediocin-producing lactococci obtained through such a strategy against L. monocytogenes, Staphylococcus aureus, and Escherichia coli O157:H7 has already been confirmed during cheese-making (Rodríguez et al., 2005).
In a previous work, pediocin PA-1 production was achieved in Lactococcus lactis using a system that was based on 3 genes: 1 (LpedA) encoding the fusion between the lactococcin A leader and propediocin PA-1, under the control of the nisin promoter (PnisA) and the other 2 (lcnCD) encoding the lactococcin A secretion machinery, under the control of their own common promoter (Horn et al., 2004). Because the lactococcal hosts were naturally resistant to pediocin PA-1, the gene conferring immunity to this bacteriocin (pedB) was not included in the system.
However, resistance and immunity to a bacteriocin are not equivalent properties. Bacteriocin producers are protected from their own bacteriocin by the concomitant expression of a cognate immunity protein (Fimland et al., 2002). Their cotranscription can play a crucial role for the bacteria to be able to produce and withstand the bacteriocin (Quadri et al., 1997; Eijsink et al., 1998; Kemperman et al., 2003). In this context, the aim of this study was to assess if the introduction of pedB, the pediocin PA-1 immunity gene in the heterologous system previously developed, may lead to an enhancement of pediocin PA-1 production in Lactococcus lactis.
Lactococcal strains used in this study are listed in Table 1 and were grown as described previously (Horn et al., 2004). Pediococcus acidilactici 347 (Rodríguez et al., 1997) was grown in de Man, Rogosa, and Sharpe (MRS) medium at 30°C. Escherichia coli was used as an initial cloning host and was grown in Luria broth at 37°C on an orbital shaker. When appropriate, chloramphenicol (Sigma, Poole, UK) or erythromycin (Sigma) was added to the cultures (Horn et al., 2004).
Table 1. Lactococcal strains used in this study
| Bacteriocin determinant1 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Strain no. | Host | Plasmid | nLpedA | nLpedAB | lcnCD | nis | Δnis | Reference or source |
| FI7847 | + | Dodd et al., 1996 | ||||||
| FI5876 | + | Dodd et al., 1990 | ||||||
| FI9917 | FI7847 | pFI2391 | + | + | + | Horn et al., 2004 | ||
| pFI2148 | ||||||||
| FI10411 | FI7847 | pFI2518 | + | + | + | This study | ||
| pFI2148 | ||||||||
| FI10389 | FI7847 | pFI2512 | + | + | + | This study | ||
| FI10488 | FI7847 | pFI2527 | + | + | + | This study | ||
| FI10038 | FI5876 | pFI2391 | + | + | + | Horn et al., 2004 | ||
| pFI2148 | ||||||||
| FI10415 | FI5876 | pFI2518 | + | + | + | This study | ||
| pFI2148 | ||||||||
| FI10392 | FI5876 | pFI2512 | + | + | + | This study | ||
| FI10486 | FI5876 | pFI2527 | + | + | + | This study | ||
1nLpedA contains the hybrid L-pedA gene preceded by the nisin promoter; nLpedAB contains the hybrid L-pedAB gene preceded by the nisin promoter; nis contains the nisin gene cluster; and Δnis contains the nisin gene cluster with a frameshift mutation in codon 16 of the nisin structural gene impeding nisin biosynthesis (the sequences of the downstream nisin cluster genes are unaffected). |
Initially, the splice overlap extension technique was used to construct a fragment containing 2 PnisA-controlled genes: the hybrid structural gene (LpedA) and pedB. This involved the amplification of 2 DNA fragments. Primers pAD1 (5′-CCTGAATAATATAGAGA-TAGGTT-3′) (Horn et al., 2004) and plcnF (5′-CCATTAC-CGTAGTATTTTCCTCCGTTAGCTTC-3′) (Horn et al., 1998) were used to amplify a 330-bp fragment (fragment 1) containing PnisA and the part of the hybrid gene encoding the lactococcin A leader. Plasmid pFI2391 (Horn et al., 2004) was used as template. The 17 nucleotides forming a tail at the 5′ end of primer plcnF (underlined) are complementary to the sequence encoding the amino-terminal portion of mature pediocin PA-1. Primers ppedE (5′-GAAGCTAACGGAGGAAAATACTACGG-TAATGG-3′) (Horn et al., 1998) and ppedG (5′-TTCTTA-GACAACTACAATATCCC-3′) were employed to amplify a 560-bp fragment (fragment 2), comprising the part of the hybrid gene encoding mature pediocin PA-1 and pedB using P. acidilactici 347 as the template. Primer ppedE was designed with a 5′ tail of 15 nucleotides (underlined) that were complementary to a part of the sequence encoding the lactococcin A leader. Fragments 1 and 2 were diluted in water and mixed in equal quantities; the mixture was then used as template to amplify an 835-bp fragment with primers pAD1 and ppedG. This fragment was cloned into pCR2.1 (Invitrogen, Paisley, UK), and nucleotide sequence analysis confirmed that it was composed of sequences corresponding precisely to the construction LpedA-pedB under the control of PnisA. The hybrid genes and upstream promoter region were isolated as an EcoRI fragment and cloned into pTG262 to generate pFI2518. Cotransformation of L. lactis FI7847 and FI5876 with pFI2518 and pFI2148 (a plasmid that carries the lcnCD genes; Horn et al., 1999) generated strains FI10411 and FI10415, respectively. In addition, a 3.8-kb SacI/XbaI fragment from pFI2148 containing the lcnCD genes and the upstream promoter was cloned into pFI2391 (PnisA-LpedA) (Horn et al., 2004) and pFI2518 (PnisA-LpedA-pedB) to generate pFI2512 and pFI2527, respectively. Transformation of L. lactis FI7847 with pFI2512 or pFI2527 generated FI10389 and FI10488, respectively, and transformation of L. lactis FI5876 generated FI10392 and FI10486, respectively.
Plate diffusion bioassays (Dodd et al., 1992) were performed in triplicate to detect pediocin PA-1 and nisin antimicrobial activities in culture supernatants of L. lactis FI7847, FI5876, and their respective transformants. All the cultures had a bacterial concentration of approximately 1
×
109 cfu/mL. Such activities were also evaluated using a microtiter plate assay as described by Holo et al. (1991). Enterococcus faecalis TAB 28 (pediocin-sensitive, nisin-resistant; Joosten et al., 1997) and L. lactis FI9180 (pediocin-resistant, nisin-sensitive; Horn et al., 2004) were used as the indicator organisms. A series of pediocin PA-1 standards in GM17 broth, ranging from 0 to 5
μg/mL, was used to quantify the production of this bacteriocin. Pediocin PA-1 purity was determined by a competitive indirect ELISA using the polyclonal antibodies and the conditions described by Martínez et al. (1999).
All the L. lactis recombinant strains were able to produce pediocin PA-1 provided that, in the case of the FI7847 derivatives, subinhibitory levels of nisin A (100 ng/mL) were added to the culture media. The agar bioassays revealed that, among the FI7847 derivatives, the pediocin yields of FI9917, FI10411, FI10389, and FI10488 were 288, 514, 648, and 835 ng/mL, respectively (Table 2). These yields represent between 17 and 49% of the pediocin found in the culture supernatants of P. acidilactici 347. These results showed that introduction of the pedB gene in the heterologous production system increased pediocin PA-1 production when all the genes required for its biosynthesis were distributed either in 2 plasmids (FI9917 vs. FI10411; increase of 13% with respect to the parental strain) or in an unique plasmid (FI10389 vs. FI10488; increase of 11%). In addition, pediocin production was greater using the single-plasmid system (Table 2). The reason for this increased yield was that, in this case, all the genes required for heterologous production of pediocin PA-1 are carried on a lactococcal plasmid (pFI2512 or pFI2527) derived from pSH71, which is maintained at 50 to 60 copies per cell (Gasson and Anderson, 1985). In contrast, in the 2-plasmid system, lcnC and lcnD are carried by the low-copy-number plasmid pFI2148 (6 to 9 copies per cell; Simon and Chopin, 1988), a fact that may affect the efficiency of pediocin PA-1 secretion.
Table 2. Pediocin PA-1 production1
| Plate diffusion method | Microplate method | |||
|---|---|---|---|---|
| Strain | ng/mL | % | BU2 | % |
| Pediococcus acidilactici 347 | 1,698 | 100 | 1,280 | 100 |
| Lactoccus lactis FI9917 | 288 | 17 | 232 | 18 |
| L. lactis FI10411 | 514 | 30 | 412 | 33 |
| L. lactis FI10389 | 648 | 38 | 528 | 42 |
| L. lactis FI10488 | 835 | 49 | 695 | 55 |
| L. lactis FI10038 | 638 | 38 | 424 | 34 |
| L. lactis FI10415 | 624 | 37 | 490 | 39 |
| L. lactis FI10392 | 1,215 | 72 | 873 | 69 |
| L. lactis FI10486 | 1,657 | 98 | 1,208 | 96 |
1Values are given for bacteriocin concentration/activity and percentage of the yield achieved by the natural producing strain, Pediococcus acidilactici 347. |
2One BU (bacteriocin unit) is defined as the reciprocal of the highest dilution causing 50% growth inhibition of the indicator organism Enterococcus faecalis TAB 28. |
In relation to the FI5876 derivatives, the bioassays showed that the pediocin yields of FI10038, FI10415, FI10392, and FI10486 were 638, 624, 1,215, and 1,657 ng/mL, respectively (Table 2). The strains carrying the 2-plasmid system (FI10038, FI10415) produced a similar amount of pediocin PA-1 (624 to 638 ng/mL), regardless of the presence or not of pedB. Probably, this observation is due to the saturation of the dedicated secretion process once a pediocin concentration of 600 ng/mL is achieved and, again, reflects the limitation of carrying lcnCD genes in a low-copy plasmid. In fact, when the lcnCD genes were included in the single high-copy plasmid system (strains FI10392 and FI10486), pediocin production increased significantly (>34%) and this enhancement was notably greater (60%) when pedB was included (FI10486). As a result, the pediocin concentration found in the supernatants of FI10486 was similar (98%) to that found in P. acidilactici 347 supernatants.
The fact that the pediocin PA-1 yields of the FI5876 derivatives were greater than those of their FI7847-derived equivalents may reflect the amount of inducing nisin present in the external environment. The nisin-producing FI5876 cells are in a permanent state of induction with continual production of the lantibiotic (Dodd et al., 1996), whereas nisin-controlled pediocin PA-1 production by FI7847 derivatives relied on subinhibitory levels of nisin added to the growth medium. Lactococcus lactis FI7847 is an FI5876 derivative that carries a 20-bp insertion in the nisin structural gene nisA, resulting in its inactivation; however, the nisin promoter of FI7847 is unaffected, allowing expression of downstream genes as a result of transcriptional readthrough (Dodd et al., 1996).
Agar diffusion and microtiter plate bioassays showed good correlation when the values were expressed as a percentage of the yield or activity achieved by P. acidilactici 347 supernatants (Table 2). In addition, both techniques revealed that all FI5876 derivatives produced quantities of nisin at 92 to 98% of that of the parental strain FI5876, which is in agreement with previously published data by Horn et al. (1999, 2004). Lactococcus lactis FI10486 has the ability to coproduce 2 wide-spectrum bacteriocins, pediocin PA-1 and nisin A, at levels comparable to the respective parental strains. Previous studies have reported maximum pediocin yields of approximately 30% of that of P. acidilactici 347 in laboratory (Horn et al., 2004) or wild (Reviriego et al., 2005, 2007) lactococcal strains that coproduce nisin and pediocin PA-1 through the leader exchange strategy. The synergistic effects of these 2 unrelated bacteriocins against foodborne pathogens and the beneficial effects of their coproduction (Hanlin et al., 1993; Mulet-Powell et al., 1998; Horn et al., 2004) can be exploited to extend their potential application in the dairy industry.
In this study, introduction of pedB led to an increase in pediocin yields when the secretion process was not constrained by a low lcnCD copy number. Therefore, cotranscription of the structural and immunity genes may have a positive effect on heterologous systems for bacteriocin production, even in those hosts that are naturally resistant to the antimicrobial peptide. Growth curves produced similar characteristics for L. lactis strains with and without the pedB gene. Also, the increase in pediocin PA-1 yields was shown not to be accompanied by an increase in the bacterial resistance to this bacteriocin because all were naturally resistant to pediocin at the maximum concentration tested (approximately 2
μg/mL) during plate diffusion bioassays. Serial subcultures of L. lactis FI10486 showed stability of pFI2527 in the lactococcal host for at least 100 generations under nonselective conditions. Presence of PedB may increase the efficacy of the biosynthetic process because it has been described that one of the nisin immunity systems (NisFEG) is a membrane-protein complex that contributes to the transport of the lantibiotic from the cytoplasmic membrane to the extracellular space (Stein et al., 2003). A role for other bacteriocin immunity genes in the export of antimicrobial agents has also been reported (Matsumoto-Nakano and Kuramitsu, 2006). Work is in progress to investigate the efficacy of this pediocin-production system in wild L. lactis strains when they are added as adjunct cultures for the control of undesirable microorganisms during cheese ripening.
Acknowledgments
This work was partially supported by grant AGL2002–04609–C02–02 from the Comisión Interministerial de Ciencia y Tecnología (CICYT, Madrid, Spain). J.A. holds a fellowship from Ministerio de Educación y Ciencia, Spain.
Supplementary data
Interpretive summary.
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PII: S0022-0302(08)71133-0
doi:10.3168/jds.2007-0759
© 2008 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

