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Research| Volume 102, ISSUE 12, P10983-10996, December 2019

Assessing availability of amino acids from various feedstuffs in dairy cattle using a stable isotope-based approach

Open ArchivePublished:September 20, 2019DOI:https://doi.org/10.3168/jds.2019-16597

      ABSTRACT

      Nitrogen efficiency in dairy cows can be improved by more precisely supplying essential amino acids (EAA) relative to animal needs, which requires accurate estimates of the availability of individual EAA from feedstuffs. The objective of this study was to determine EAA availability for 7 feed ingredients. Seven heifers (258 ± 28 kg BW) were randomly chosen and assigned to 8 treatment sequences in a 7 × 8 incomplete Latin square design. Treatments were a basal diet (BD), and 10% (on a dry matter basis) of BD replaced by corn silage (CS), grass hay (GH), alfalfa hay (AH), dried distillers grain (DDGS), soybean hulls (SH), wet brewers grain (BG), or corn grain (CG). Total plasma AA entry rates were estimated for each EAA within each diet by fitting a 4-pool dynamic model to observed plasma, 13C AA enrichment resulting from a 2-h constant infusion of a 13C algal AA mixture. Individual EAA availability from each test ingredient was determined by regression of entry rates for that AA on crude protein intake for each ingredient. The derived plasma total EAA entry rates for corn silage, grass hay, alfalfa hay, dried distillers grain, soyhulls, brewers grain, and corn grain were 30.6 ± 3.4, 27.4 ± 3.2, 31.3 ± 3.4, 37.2 ± 3.2, 26.4 ± 3.2, 37.8 ± 3.2, and 33.5 ± 3.2% (±standard error) of EAA from each ingredient, respectively. Using the previous estimate of 8.27% EAA utilization by splanchnic tissues during first pass, total rumen-undegradable protein EAA absorbed from the gut lumen was 33.4, 29.9, 34.1, 40.6, 28.8, 41.2, and 36.5% of the EAA in each ingredient respectively.

      Key words

      INTRODUCTION

      Improving N efficiency of dairy production has received a lot of attention due to feed costs and environmental concerns (
      • Külling D.
      • Menzi H.
      • Kröber T.
      • Neftel A.
      • Sutter F.
      • Lischer P.
      • Kreuzer M.
      Emissions of ammonia, nitrous oxide and methane from different types of dairy manure during storage as affected by dietary protein content.
      ;
      • Agle M.
      • Hristov A.
      • Zaman S.
      • Schneider C.
      • Ndegwa P.
      • Vaddella V.
      Effect of dietary protein level and degradability and energy density on ammonia losses from manure in dairy cows.
      ;
      • Bouwman L.
      • Goldewijk K.K.
      • Van Der Hoek K.W.
      • Beusen A.H.
      • Van Vuuren D.P.
      • Willems J.
      • Rufino M.C.
      • Stehfest E.
      Exploring global changes in nitrogen and phosphorus cycles in agriculture induced by livestock production over the 1900–2050 period.
      ). During the past decades, producers generally maximized milk yield to improve profit margins by overfeeding protein, which is the main cause of inefficient N utilization (
      • Doepel L.
      • Pacheco D.
      • Kennelly J.
      • Hanigan M.
      • Lopez I.
      • Lapierre H.
      Milk protein synthesis as a function of amino acid supply.
      ;
      • Colmenero J.J.
      • Broderick G.A.
      Effect of amount and ruminal degradability of soybean meal protein on performance of lactating dairy cows.
      ). The simplest strategy to optimize N utilization is to lower dietary protein (
      • Kebreab E.
      • Strathe A.
      • Dijkstra J.
      • Mills J.A.
      • Reynolds C.K.
      • Crompton L.A.
      • Yan T.
      • France J.
      Energy and protein interactions and their effect on nitrogen excretion in dairy cows.
      ), but this increases the risk of MP deficiency, resulting in decreased milk protein yield (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ;
      • Cabrita A.R.
      • Dewhurst R.J.
      • Melo D.S.
      • Moorby J.M.
      • Fonseca A.J.
      Effects of dietary protein concentration and balance of absorbable amino acids on productive responses of dairy cows fed corn silage-based diets.
      ). Studies in monogastric animals have showed that balancing AA supply with animal requirements can improve the efficiency of N utilization (
      • Baker D.H.
      Advances in amino acid nutrition and metabolism of swine and poultry.
      ;
      • Nahm K.
      Efficient feed nutrient utilization to reduce pollutants in poultry and swine manure.
      ). In ruminants, optimizing N efficiency may be achieved by providing RUP with an AA profile that complements microbial AA flow (
      • Ipharraguerre I.R.
      • Clark J.H.
      • Freeman D.E.
      Rumen fermentation and intestinal supply of nutrients in dairy cows fed rumen-protected soy products.
      ;
      • Haque M.N.
      • Rulquin H.
      • Andrade A.
      • Faverdin P.
      • Peyraud J.L.
      • Lemosquet S.
      Milk protein synthesis in response to the provision of an “ideal” amino acid profile at 2 levels of metabolizable protein supply in dairy cows.
      ). However, previous work has demonstrated that AA flow from the rumen was biased when predicted with the
      • NRC
      Nutrient Requirements of Dairy Cattle.
      system. This model overestimates RUP flow from the rumen and underestimates microbial protein (MCP) flow (
      • Bateman H.
      Response to increased rumen undegradable protein intake by lactating dairy cows.
      ;
      • Roman-Garcia Y.
      • White R.R.
      • Firkins J.L.
      Meta-analysis of postruminal microbial nitrogen flows in dairy cattle. I. Derivation of equations.
      ;
      • White R.R.
      • Roman-Garcia Y.
      • Firkins J.L.
      • Kononoff P.
      • VandeHaar M.J.
      • Tran H.
      • McGill T.
      • Garnett R.
      • Hanigan M.D.
      Evaluation of the National Research Council (2001) dairy model and derivation of new prediction equations. 2. Rumen degradable and undegradable protein.
      ). Such bias hampers efforts to achieve a perfect match between supply and requirements.
      • Bateman H.
      Response to increased rumen undegradable protein intake by lactating dairy cows.
      reported that many unknown factors affect RUP content, including DMI, protein solubility, and heat denaturation. Although some studies have showed that the EAA composition of intact feed protein and of RUP did not differ (
      • Boucher S.E.
      • Calsamiglia S.
      • Parsons C.M.
      • Stern M.D.
      • Moreno M.R.
      • Vázquez-Añón M.
      • Schwab C.G.
      In vitro digestibility of individual amino acids in rumen-undegraded protein: The modified three-step procedure and the immobilized digestive enzyme assay1.
      ;
      • Edmunds B.
      • Südekum K.-H.
      • Bennett R.
      • Schröder A.
      • Spiekers H.
      • Schwarz F.
      The amino acid composition of rumen-undegradable protein: A comparison between forages.
      ), this may only be true for feedstuffs with low ruminal degradability (
      • Boucher S.E.
      • Calsamiglia S.
      • Parsons C.M.
      • Stein H.H.
      • Stern M.D.
      • Erickson P.S.
      • Utterback P.L.
      • Schwab C.G.
      Intestinal digestibility of amino acids in rumen undegradable protein estimated using a precision-fed cecectomized rooster bioassay: I. Soybean meal and soyplus1.
      ).
      • Paz H.A.
      • Klopfenstein T.J.
      • Hostetler D.
      • Fernando S.C.
      • Castillo-Lopez E.
      • Kononoff P.J.
      Ruminal degradation and intestinal digestibility of protein and amino acids in high-protein feedstuffs commonly used in dairy diets.
      found that the AA profile of RUP was altered during a 16-h ruminal incubation and that the extent of change varied by AA and feedstuff. Furthermore, previous studies showed the AA digestibility of RUP varied across feedstuffs and individual AA (
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      ). Therefore, using a common digestibility across EAA based on CP digestibility may lead to errors in predicting EAA availability (
      • Borucki Castro S.I.
      • Phillip L.E.
      • Lapierre H.
      • Jardon P.W.
      • Berthiaume R.
      Ruminal degradability and intestinal digestibility of protein and amino acids in treated soybean meal products.
      ).
      Dried distillers grain, corn grain, brewers grain, soybean hulls, soybean meal, corn silage, alfalfa hay, and grass hay are widely used dietary ingredients in North American dairy rations. In 2016, total use of corn grain and soybean meal in the United States represented 66.3 and 14.7%, respectively, of concentrate feeds fed to livestock and poultry (
      • USDA
      Agricultural statistics.
      ). In 2016, total use of corn grain in the United States represented 66.3% of concentrate feeds fed to livestock and poultry (
      • USDA
      Agricultural statistics.
      ). The exact proportions of overall feed usage represented by each are not available for dairy. According to
      • AFIA
      U.S. Animal Food Consumption Report.
      , total consumption of corn grain, soybean meal, dried distillers grain, and soybean hulls by dairy cows in 2016 was 14.73, 2.58, 2.43, and 1.39 million tons, which represented approximately 68.1, 11.9, 11.2, and 6.4% of concentrates fed to dairy cows, respectively. However, these estimates may be biased, as most of the other byproducts were excluded from the diet simulations. Corn silage and alfalfa hay also represent a large fraction of forages consumed by dairy cattle. For example, total usage of corn silage by U.S. dairy cattle in 2016 was 41.3 million tons (
      • AFIA
      U.S. Animal Food Consumption Report.
      ). Some studies have been conducted to investigate the digestibility of individual AA of RUP for various feed ingredients in the past decades. For example, in situ studies showed that the AA digestibility of RUP from soybean meal varied from 92.7% (Arg) to 95.3% (Thr), and the values for dried distillers grain varied from 87.4% (His) to 95% (Leu;
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      ).
      • van Straalen W.M.
      • Odinga J.J.
      • Mostert W.
      Digestion of feed amino acids in the rumen and small intestine of dairy cows measured with nylon-bag techniques.
      indicated that the AA digestibility of RUP from soybean hulls varied from 61% (Tyr) to 85% (Arg).
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      found that the AA digestibility of RUP AA varied from 60% (Arg) to 85% (Met) for corn silage, from 59% (Met) to 87% (Lys) for alfalfa, and from 76% (Thr) to 92% (Met) for corn grain. But as
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      stated, the current AA degradation and digestibility database is incomplete and contains inadequate experimental replication for commonly used feeds in the field. More importantly, these values were mainly from in vitro and in situ studies, which have not been fully validated against in vivo observations, and, where examined, have been found to differ from in vivo observations (
      • Titgemeyer E.C.
      • Merchen N.R.
      • Berger L.L.
      Evaluation of soybean meal, corn gluten meal, blood meal and fish meal as sources of nitrogen and amino acids disappearing from the small intestine of steers.
      ;
      • Estes K.A.
      Assessing intestinal absorption of amino acids utilizing an isotope based approach.
      ).
      Determining the apparent AA digestibility for the diet or RUP in ruminants is technically difficult due largely to errors of measurement associated with sample collection and animal variation (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ). Although in vitro digestibility may represent true values for some ingredients, they are not applicable to all ingredients (
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      ), and thus research on intestinal availability of individual AA from feedstuffs is quite limited (
      • Titgemeyer E.C.
      • Merchen N.R.
      • Berger L.L.
      Evaluation of soybean meal, corn gluten meal, blood meal and fish meal as sources of nitrogen and amino acids disappearing from the small intestine of steers.
      ;
      • Ipharraguerre I.R.
      • Clark J.H.
      • Freeman D.E.
      Rumen fermentation and intestinal supply of nutrients in dairy cows fed rumen-protected soy products.
      ). Measuring in vivo disappearance from the intestine is technically difficult and invasive, requiring surgical insertion of cannulas (
      • Titgemeyer E.C.
      • Merchen N.R.
      • Berger L.L.
      Evaluation of soybean meal, corn gluten meal, blood meal and fish meal as sources of nitrogen and amino acids disappearing from the small intestine of steers.
      ). The in vivo method of plasma AA concentration responses after an abomasal pulse dose is simpler and has been used to assess rumen-protected Met and Lys (
      • Graulet B.
      • Richard C.
      • Robert J.
      Methionine availability in plasma of dairy cows supplemented with methionine hydroxy analog isopropyl ester.
      ;
      • Whitehouse N.
      • Schwab C.
      • Fredin S.
      • Brito A.
      Determination of relative methionine bioavailability in lactating cows fed Smartamine M, Mepron, and Aminoshure M using the plasma-free aa dose–response method.
      ). However, it is difficult to apply to all AA in feed ingredients.
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      adapted a stable isotope approach used by
      • Maxin G.
      • Ouellet D.
      • Lapierre H.
      Ruminal degradability of dry matter, crude protein, and amino acids in soybean meal, canola meal, corn, and wheat dried distillers grains.
      to assess AA availability from individual feed ingredients. This method makes use of a 4- to 8-h constant infusion of a 13C-labeled AA mixture derived from enriched algae to assess the plasma entry rate of each AA. Because infusions and sampling are performed via the jugular vein, measurements can be made with minimal animal preparation. Errors of determination for AA availability from each ingredient are approximately 10% using this method, which is a large improvement over previously used methods (
      • Titgemeyer E.C.
      • Merchen N.R.
      • Berger L.L.
      Evaluation of soybean meal, corn gluten meal, blood meal and fish meal as sources of nitrogen and amino acids disappearing from the small intestine of steers.
      ).
      Our hypothesis was that the stable isotope-based approach can be used to determine AA availability across various feedstuffs with high or low protein content. Additionally, extending the knowledge of AA availability to more commonly used feed ingredients will provide a basis for improvements to our feeding systems. Therefore, the objective of this study was to determine plasma EAA availability and RUP digestibility for 7 feed ingredients commonly used in dairy rations: dried distillers grain, corn grain, wet brewers grain, soybean hulls, corn silage, alfalfa hay, and grass hay.

      MATERIALS AND METHODS

      Animals and Treatments

      All animal procedures were conducted at the Virginia Tech Kentland Dairy Farm and approved by the Virginia Tech Animal Care and Use Committee. Seven Holstein heifers (258 ± 28 kg BW) were randomly selected and assigned to 8 treatments in a 7 × 8 incomplete Latin square design, with 8 periods of 10 d each. Treatments were a high-protein basal diet (BD), and 10% (DM basis) of BD replaced by corn silage (treatment CS), grass hay (GH), alfalfa hay (AH), soybean hulls (SH), dried distillers grain (DDGS), wet brewers grain (BG), or corn grain (CG; Table 1). Kentland farm of Virginia Tech (Blacksburg, VA) supplied alfalfa hay, grass hay, and corn silage, and grains were purchased from Rockingham Milling Company (Harrisonburg, VA). The BD contained a mix of corn silage, dried grass hay, soybean meal, and vitamins and minerals (Table 1). The MP supply of BD was 860 g/d, which greatly exceeded
      • NRC
      Nutrient Requirements of Dairy Cattle.
      recommendations (534 g/d), to ensure that microbial protein synthesis and body protein synthesis were not altered by the treatments. Animals were fed once a day ad libitum from d 1 to 8. On d 6, animals were moved to metabolism stalls at 0800 h, and fed at 6-h intervals through d 8. On d 9 and 10, animals were fed every 2 h, and feed offered was restricted to 95% of the ad libitum DMI observed for the previous 3 d, to ensure that each meal was eaten and to minimize variation in AA absorption, according to
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      .
      Table 1Diet composition and formulated nutrients; diets were formulated for a 272-kg BW heifer with a DMI of 6.6 kg/d
      ItemTreatment
      BD = basal diet; CS = 90% BD + 10% corn silage; GH = BD + grass hay; AH = BD + alfalfa hay; DDGS = BD + dried distillers grain; SH = BD + soybean hulls; DCDG = BD + dried corn distillers grain; BG = BD + wet brewers grain; CG = BD + corn grain.
      BDCSCGAHGHSHDDGSBG
      Ingredients (% DM)
       Grass hay, mature34.731.231.231.241.231.231.231.2
       Corn silage, mature34.741.031.131.131.131.131.131.1
       Soybean meal, 48% CP29.826.826.826.826.826.826.826.8
       Dried corn grain, cracked9.9
       Alfalfa hay10.0
       Soyhulls10.0
       Dried corn distillers grain10.0
       Wet brewers grain9.9
       Vitamin and mineral premix0.90.90.90.90.90.90.90.9
      Nutrient composition
      Nutrient components were estimated from the NRC (2001).
       CP (%)22.721.321.422.321.521.823.423.3
       RDP (g/d)
      Required653652666645644654662657
      Supplied923863872916871891940961
       MP (g/d)
      Required534537536537536538536529
      Supplied860841847831844852890832
       NDF (%)42.342.53942.244.944.141.942.7
       ADF (%)25.825.923.526.527.327.725.225.5
       NEG (Mcal/kg of DM)1.01.01.11.01.01.01.11.0
       Ether extract (%)2.12.22.32.22.12.22.92.4
      1 BD = basal diet; CS = 90% BD + 10% corn silage; GH = BD + grass hay; AH = BD + alfalfa hay; DDGS = BD + dried distillers grain; SH = BD + soybean hulls; DCDG = BD + dried corn distillers grain; BG = BD + wet brewers grain; CG = BD + corn grain.
      2 Nutrient components were estimated from the
      • NRC
      Nutrient Requirements of Dairy Cattle.
      .
      On d 7 to 9 of each period, spot fecal samples were collected every 6 h, with the collection time rotating forward 2 h on the second day of collection and 4 h on the third day of collection. Samples were stored at −20°C until analysis. Feed and refusal samples were collected between 0700 and 0800 h daily from d 6 through 10 and, at the end of the infusion, dried at 55°C for 72 h and stored for further analysis.
      On d 8 of each period, each heifer was fitted with 2 jugular catheters in the same side, as described by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      . In short, the infusion catheter (90 cm × 2.03 mm internal diameter; Braintree Scientific Inc., Braintree, MA) tip was placed approximately 40 cm downstream of the tip of the sampling catheter (13 cm × 1.6 mm internal diameter; Jorvet, Loveland, CO) to ensure infusate circulation through the circulatory system before blood sampling. Catheters were placed on alternate sides of the neck in successive periods. On d 10, animals were given a constant jugular infusion of 0.2 g of a sterile 13C-labeled algal AA mix dissolved in 100 mL saline (U-13C, 97 to 99% enriched; Cambridge Isotope Laboratories, Andover, MA) over a 2-h period using clinical infusion pumps (LifeCare 5000, Abbott Laboratories, North Chicago, IL). Infusions were initiated at 1100 h and ended at 1300 h. Blood samples (8 to 10 mL each) were collected at −15, 15, 30, 45, 60, 75, 90, 105, 120, 135, 150, 165, 180, 195, 210, and 240 min relative to the start of the infusion and stored on ice until processing. Plasma was prepared from the blood samples by centrifugation for 15 min at 1665 × g within 4 h of sampling. Plasma was stored at −20°C until further analysis.

      Sample Analysis

      Feed and Fecal Sample Analysis

      Dried TMR and fecal samples were pooled by animal and period and ground to 2 mm (Wiley Mill, Thomas Scientific, Swedesboro, NJ). Duplicate subsamples (10 g of TMR or 5 g of feces) were placed in 10 × 20-cm Dacron bags with 50 ± 15-μm pore size (Ankom, Macedon NY); the ratios of sample size to surface area were 25 and 12.5 mg/cm2 specifically (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ). The bags were incubated in the rumen of 2 cows (fed the BD diet; one replicate in each animal) for 12 d to determine indigestible NDF (iNDF) content (
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      ). The NDF content of the residue was determined using amylase and an Ankom Fiber Analyzer 200, and iNDF was assumed to be the residue after Ankom digestion. Dry, ground feed ingredients (25 to 40 mg) and fecal samples were analyzed for N content by combustion using a Vario EL cube analyzer (Elementar, Germany). Results were used to calculate fecal DM output and total-tract apparent N digestibility as described by
      • Cochran R.
      • Adams D.
      • Wallace J.
      • Galyean M.
      Predicting digestibility of different diets with internal markers: Evaluation of four potential markers1.
      .

      Ruminal Protein Degradation of Feed Ingredients

      Two subsamples of feed ingredients were sent to Cumberland Valley Analytical Services (Waynesboro, PA) for in vitro rumen and intestinal digestibility analysis of protein (MSPE package). Another subsample was used for in situ ruminal protein degradation analysis. The same 2 cows used for TMR and fecal sample incubation were used here. All ingredients (SBM, CS, CG, AH, GH, SH, and DDGS) were ground to 2 mm, 10 g of which were weighed into Dacron bags (10× 20 cm, 50-µm pore size; Ankom, Macedon, NY), and bags containing samples were incubated in the rumen for 0, 3, 9, 12, 15, 24, 36, 48, 72, 96, and 108 h. Upon removal from the rumen, samples were rinsed in cold water and then washed through the delicate cold cycle in a washing machine without detergent and frozen at −20°C followed by freeze drying. Twenty-five to forty mg of ground feed ingredients were used for nitrogen analysis as described above.
      The insoluble but degradable fraction (B) and insoluble and undegradable fraction (C) of each ingredient and the rate of N degradation (Kd) were determined by fitting the following model, a modification of that described by
      • Ørskov E.
      • McDonald I.
      The estimation of protein degradability in the rumen from incubation measurements weighted according to rate of passage.
      , to the data:
      N(t)(% of initial)=C+B×e[-Kd×t].
      [1]


      The soluble fraction (A) was calculated from the model-derived B and C fractions as follows:
      A = 100 − B − C,
      [2]


      where N(t) was the N remaining at time t (% of initial N content). The A fraction (% of initial N content) represents N escaping from the bag at time 0, which mostly reflects soluble N but may include some very small particles. The C fraction (% of initial N content) is the nondegradable N at t = 108 h, and Kd represents the rate of B-fraction N loss from the bag (h−1). We attempted to introduce lag time; however, this made no difference and thus was removed.

      Plasma Sample Analysis

      All plasma samples were deproteinized by addition of sulfosalicylic acid (8%, wt/vol) followed by centrifugation at 1,600 × g for 15 min at 4°C. To measure the 13C-labeled AA, deproteinized samples were desalted by ion exchange chromatography (BioRad Resin AG 50W-X8*, 100 to 200 mesh; Bio-Rad, Hercules, CA) and eluted using ammonium hydroxide (2N) into silanized glass vials, as described by
      • Calder A.G.
      • Garden K.E.
      • Anderson S.E.
      • Lobley G.
      Quantitation of blood and plasma amino acids using isotope dilution electron impact gas chromatography/mass spectrometry with u-13c amino acids as internal standards.
      . Desalted samples were freeze-dried and derivatized as described by
      • Walsh R.G.
      • He S.
      • Yarnes C.T.
      Compound-specific δ13c and δ15n analysis of amino acids: A rapid, chloroformate-based method for ecological studies.
      . Measurements of isotopic ratios of 13C-labeled AA were performed using an isotope-ratio mass spectrometer coupled to a GC by a combustion oven (Thermo Fisher Scientific, Waltham, MA).

      Amino Acid Entry Rate Derivation

      All modeling work was completed in R Studio (version 1.0.143) with R 3.2.1 (R Core Team, Vienna, Austria), using the 4-pool dynamic model described by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      . In short, state variables were total AA in fast (QAAFast) and slow turnover pools (QAASlow) and labeled AA in fast (QAAiFast) and slow turnover pools (QAAiSlow). The fast turnover pool is thought to represent blood, interstitial, and cytoplasmic free AA but also likely includes some protein with short half-lives (i.e., less than 30 min), whereas the slow turnover pool should only represent protein-bound AA.
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      indicated that the size of the slow turnover pool cannot be accurately estimated with a 2-h infusion, resulting in underestimates of plateau and overestimates of total AA entry rates. In the current study, we were also unable to solve for stable slow turnover rates, which reduces the accuracy of the plateau estimate (Figure 1), likely resulting in underestimated AA incorporation into the slow turnover pool and overestimated AA entry rates. However, the bias was accommodated in the intercept of the regression model that was fit across the treatments to derive the proportion of feed AA appearing in blood and, thus, was not problematic. We did not adopt the longer infusion time recommended by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      , solely because the animal work for this study was completed before the
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      work was completed. Because the model explicitly represents exchange of AA with body tissue, the derived AA entry rates represent only absorption (EAA) or absorption plus de novo synthesis (NEAA) minus loss of AA to splanchnic catabolism during the first pass.
      Figure thumbnail gr1
      Figure 1Predicted and observed Leu isotopic ratios versus infusion time for 1 infusion. 13C/12C refers to the ratio of 13C labeled AA to nonlabeled AA.
      Following initial fits of the model to observed data, residuals outliers were checked, and, if studentized residuals exceeded 2 in absolute value, the sample was removed, which was the case for 14% of the data set. These outliers were generally also visually apparent when the observed data were plotted with the predicted values, as the data represented a repeated sampling sequence in time, and thus deviations from the pattern in time were clearly evident.
      The modeled AA entry rates were used to derive fractional availability values (g AA appearing in plasma/g CP consumed) for each test ingredient by regression, as described by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      . In
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      , dietary RDP was added to accommodate nutrient entry rates derived from the basal diet, excluding soybean meal and MCP, which varied when ruminally fermentable soybean meal was replaced by post-ruminal infusions of casein and EAA. In our study, substitutions were for BD, and all treatment diets had RDP that greatly exceeded
      • NRC
      Nutrient Requirements of Dairy Cattle.
      requirements, negating the need to represent potential changes in MCP using RDP.

      Statistical Analysis

      Statistical analysis was conducted in R Studio (version 1.0.143) with R 3.2.1. Data were analyzed using the mixed model function lmer in the lme4 package of R (version 3.4.3). Dry matter intake, fecal output, total-tract apparent N digestibility, and plasma AA entry rates were analyzed using the following model:
      Yijk = μ + Dieti + Periodj + Cowk + eijk


      where Yijk = dependent variable, μ = population mean of Y, Dieti = fixed effect of diet [degrees of freedom (df) = 7], Periodj = random effect of period (df = 7), and Cowk = random effect of cow (df = 6). Main effects were declared significant at P ≤ 0.05, and denominator degrees of freedom for all tests were adjusted using the Kenward-Roger option. Outliers were checked, and, if studentized residuals exceeded 2 in absolute value, the sample was removed, which was the case for approximately 5% of the data set. When main effects were significant, post-hoc testing was conducted. The lsmeansLT function of the lmerTest package was used with Kenward-Roger option and Tukey adjust for estimation of least squares means, and the difflsmeans function of the lmerTest package with Tukey adjust was used for separation of means (P < 0.05).

      RESULTS AND DISCUSSION

      All 7 animals completed the trial. An important assumption of this study was that the high-CP diets exceeded requirements for MCP synthesis and body protein accretion across treatments, so that these processes remained constant across treatments. The CP content of BD was 22.7%, which was a little higher than our formulation goal of 20%. Both BG (22.8%) and DDGS (22.8%) had higher CP content compared with BD, whereas AH (21.7%), CG (20.8%), GH (21.1%), SH (21.2%), and CS (20.8%) had lower CP content, which was anticipated, given the different CP contents of replacement ingredients. All of them greatly exceeded
      • NRC
      Nutrient Requirements of Dairy Cattle.
      requirements for RDP and MP, which achieved our formulation goal.
      Our objective was to assess individual AA availability from various feed ingredients. However, this is generally restricted to EAA, as NEAA can be synthesized by the animal, which prevents derivation of a unique estimate of absorbed entry. Derived NEAA entry rates from this study had large standard errors, which indicated that post-absorptive synthesis was variable across treatments and animals, although they were well determined in our previous study that used high-protein ingredients (
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      ). Therefore, only EAA are discussed in this report. In addition, histidine results were near baseline and quite variable due to the AA derivatization method used and thus were excluded. Amino acids with polar or charged side chains, such as histidine and serine, generally had lower recovery from alkyl chloroformates (
      • Walsh R.G.
      • He S.
      • Yarnes C.T.
      Compound-specific δ13c and δ15n analysis of amino acids: A rapid, chloroformate-based method for ecological studies.
      ).

      In Situ and In Vitro Protein Degradation for Test Ingredients

      All feed ingredients were tested for protein fractions by using in situ and in vitro methods. Although soybean meal was not tested in vivo, the in vitro and in situ results would still be useful as a reference to future in situ and in vitro work. Ruminal N digestion results from the 108-h incubation are summarized in Table 2 and Figure 2. Fraction A represents soluble N and N in particles smaller than 50 µm, which can escape from the nylon bag. The A fraction (58.4%) of DDGS greatly exceeded values reported by
      • Kleinschmit D.H.
      • Anderson J.L.
      • Schingoethe D.J.
      • Kalscheur K.F.
      • Hippen A.R.
      Ruminal and intestinal degradability of distillers grains plus solubles varies by source.
      ; 15.9 to 19.7%) and by
      • Mjoun K.
      • Kalscheur K.F.
      • Hippen A.R.
      • Schingoethe D.J.
      Ruminal degradability and intestinal digestibility of protein and amino acids in soybean and corn distillers grains products.
      ; 11.1 to 18.4%). The difference might be related to the amount of solubles added to grains according to
      • Cao Z.J.
      • Anderson J.L.
      • Kalscheur K.F.
      Ruminal degradation and intestinal digestibility of dried or wet distillers grains with increasing concentrations of condensed distillers solubles.
      , who found a linear increase in fraction A when solubles in dried distillers grain increased. Soybean meal, soyhulls, and corn silage also showed higher A fractions compared with
      • NRC
      Nutrient Requirements of Dairy Cattle.
      . Increased small-particle loss might be partially caused by sample preparation (grinding) or bag wash (machine wash), and can result in an overestimation of the A fraction (
      • Michalet-Doreau B.
      • Ould-Bah M.
      In vitro and in sacco methods for the estimation of dietary nitrogen degradability in the rumen: A review.
      ). For example, the dry-grinding process would cause fracture of seed kernels and release protein as a fine powder. The extent of such loss can be determined (
      • Maxin G.
      • Ouellet D.
      • Lapierre H.
      Ruminal degradability of dry matter, crude protein, and amino acids in soybean meal, canola meal, corn, and wheat dried distillers grains.
      ) and used to correct the data. In the current study, we machine-washed the bags, which removed bacteria but also might enhance the escape of small particles. These limitations have been noted as potentially contributing to low repeatability of the mobile bag technique within (
      • Setälä J.
      The nylon bag technique in the determination of ruminal feed protein degradation.
      ;
      • Madsen J.
      • Hvelplund T.
      Protein degradation in the rumen.
      ;
      • Michalet-Doreau B.
      • Cerneau P.
      Influence of foodstuff particle size on in situ degradation of nitrogen in the rumen.
      ) and across laboratories (
      • Oldham J.
      Testing and implementing the modern systems: UK.
      ). Compared with the soluble protein from in vitro evaluation, the A fraction from in situ evaluation was also much higher, which further indicated particle loss from bags.
      Table 2In situ evaluation of test ingredients during a 108-h ruminal incubation and in vitro evaluation from commercial test (mean ± SE)
      ItemIngredient
      Soybean mealCorn silageCorn grainAlfalfa hayGrass haySoyhullsDried distillers grainBrewers grain
      In situ evaluation
       A fraction,
      Defined as 100 − B − C.
      % CP
      26.979.929.031.826.657.158.421.0
       B fraction, % CP73.1 ± 3.620.1 ± 5.468.4 ± 5.059.4 ± 5.057.9 ± 2.141.6 ± 3.538.6 ± 3.673.6 ± 1.5
       C fraction, % CP0.0 ± 1.70.0 ± 5.92.6 ± 3.48.8 ± 3.715.5 ± 1.61.3 ± 1.73.0 ± 3.95.5 ± 1.0
      Kd,
      Rate of nitrogen degradation.
      %/h
      10.2 ± 1.11.4 ± 0.75.7 ± 1.110.7 ± 1.94.2 ± 0.43.7 ± 0.82.8 ± 0.75.3 ± 0.3
       RUP,
      Predicted with an assumed passage rate of 6%/h (NRC, 2001).
      % CP
      27.116.337.630.149.627.029.344.6
      In vitro evaluation, n = 2
       Soluble protein, % CP5.9 ± 0.549.9 ± 2.415.9 ± 2.430.2 ± 1.726.8 ± 1.216.3 ± 1.818.2 ± 0.23.6 ± 2.9
       RDP, % CP66.8 ± 0.619.3 ± 0.120.2 ± 0.346.2 ± 2.951.5 ± 4.412.8 ± 1.738.8 ± 0.227.7 ± 1.2
       RUP, % CP33.2 ± 0.680.7 ± 0.179.8 ± 0.353.9 ± 2.948.5 ± 4.487.2 ± 1.761.2 ± 0.272.3 ± 1.2
       RUP digestibility, %79.2 ± 0.268.3 ± 5.678.1 ± 0.938.2 ± 1.423.5 ± 7.464.1 ± 1.372.9 ± 1.856.7 ± 0.2
      • NRC
      Nutrient Requirements of Dairy Cattle.
       A fraction, % CP15.051.323.937.928.422.528.518.3
       B fraction, % CP84.430.272.552.752.972.263.364.6
       C fraction, % CP0.618.53.69.418.75.38.217.1
      Kd, %/h7.54.44.910.856.23.64.7
       RUP, % CP38.135.743.528.247.640.847.853.3
      1 Defined as 100 − B − C.
      2 Rate of nitrogen degradation.
      3 Predicted with an assumed passage rate of 6%/h (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ).
      Figure thumbnail gr2
      Figure 2Observed and predicted in situ protein degradation for the test ingredients (AH = alfalfa hay, BG = wet brewers grain, CS = corn silage, DDGS = dried distillers grain, CG = corn grain, GH = grass hay, SH = soybean hulls) and soybean meal (SBM). (A) Observed and predicted in situ protein degradation for AH, BG, CS, and DDGS. (B) Observed and predicted in situ protein degradation for CG, GH, SBM, and SH.
      The Kd is affected by many factors, including particle size and protein structure (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ). Smaller particle size increases the surface area per unit of mass and thus the rate of degradation. Therefore, the higher rate of degradation for soybean meal, soyhulls, and corn grain compared with NRC may be indicative of reduced particle size, which was consistent with our observations of greater A fractions. The heat processing of dried distillers grain makes it more resistant to ruminal degradation (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ;
      • Doiron K.
      • Yu P.
      • McKinnon J.J.
      • Christensen D.A.
      Heat-induced protein structure and subfractions in relation to protein degradation kinetics and intestinal availability in dairy cattle.
      ;
      • Mjoun K.
      • Kalscheur K.F.
      • Hippen A.R.
      • Schingoethe D.J.
      Ruminal degradability and intestinal digestibility of protein and amino acids in soybean and corn distillers grains products.
      ), which was consistent with its low Kd. The potentially degradable CP (fraction B) was low for soybean meal, corn silage, soyhulls, and distillers grain compared with
      • NRC
      Nutrient Requirements of Dairy Cattle.
      , which was consistent with their high A fraction content. Fraction C is the nondegradable N. The fraction C value may be related to heat processing of the protein, which can vary widely within feedstuffs (
      • Kleinschmit D.H.
      • Anderson J.L.
      • Schingoethe D.J.
      • Kalscheur K.F.
      • Hippen A.R.
      Ruminal and intestinal degradability of distillers grains plus solubles varies by source.
      ;
      • Mjoun K.
      • Kalscheur K.F.
      • Hippen A.R.
      • Schingoethe D.J.
      Ruminal degradability and intestinal digestibility of protein and amino acids in soybean and corn distillers grains products.
      ). For example, the degradation of individual AA in corn silage during 12-h rumen incubation varied from 19 (
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      ) to 71% (
      • van Straalen W.M.
      • Odinga J.J.
      • Mostert W.
      Digestion of feed amino acids in the rumen and small intestine of dairy cows measured with nylon-bag techniques.
      ). In the current study, the rumen protein degradation parameters of dry hays (alfalfa hay and grass hay) were more consistent with
      • NRC
      Nutrient Requirements of Dairy Cattle.
      , which was expected, considering their small variations in processing and protein structures (
      • Janicki F.J.
      • Stallings C.C.
      Degradation of crude protein in forages determined by in vitro and in situ procedures.
      ).
      The calculated RUP for soybean meal, distillers gain, soyhulls, corn grain, and corn silage were all lower than values from
      • NRC
      Nutrient Requirements of Dairy Cattle.
      and previous studies (
      • Paz H.A.
      • Klopfenstein T.J.
      • Hostetler D.
      • Fernando S.C.
      • Castillo-Lopez E.
      • Kononoff P.J.
      Ruminal degradation and intestinal digestibility of protein and amino acids in high-protein feedstuffs commonly used in dairy diets.
      ), which is consistent with larger A fractions and smaller B and C fractions in the current work. The differences among studies could be caused by variability in feedstuff composition or feed and sample processing (
      • Maxin G.
      • Ouellet D.
      • Lapierre H.
      Ruminal degradability of dry matter, crude protein, and amino acids in soybean meal, canola meal, corn, and wheat dried distillers grains.
      ). Compared with in situ and NRC values, the RUP results from in vitro testing were much greater for all ingredients except soybean meal and grass hay. This is due primarily to reduced soluble protein, suggesting that particle loss from the bags was a problem. However, we still found significant deviations in RUP estimates from the in vitro evaluations compared with the NRC value. This may be because the in vitro method cannot mimic the bioenvironment of the rumen; for example, a single incubation time may be too short, or ruminal microbes may be less active in the incubation flask, which likely leads to underestimation of RDP and overestimation of RUP. Regardless of the reason for the differences among methods, the variation across methods is clear.

      Apparent Total-Tract Digestibility of N

      Feed intake, fecal output, and apparent total-tract digestibility observations are summarized in Table 3. The average DMI was 6.68 ± 0.17 kg, which was not significantly affected by treatments.
      • Zhang B.
      • Wang C.
      • Liu H.
      • Liu J.
      • Liu H.
      Effects of dietary protein level on growth performance and nitrogen excretion of dairy heifers.
      also observed that high-CP heifer diets did not affect DMI. The N intake of BD and DDGS were higher than those of CS, CG, GH, and SH but not significantly different from AH and BG. The total-tract apparent N digestibility was not significantly different among treatments, with an average value of 63.1%.
      • Anderson J.L.
      • Kalscheur K.F.
      • Garcia A.D.
      • Schingoethe D.J.
      Feeding fat from distillers dried grains with solubles to dairy heifers: I. Effects on growth performance and total-tract digestibility of nutrients.
      indicated that increasing DDGS in heifer diets from 30 to 50% increased total-tract CP digestibility. In this study, we did not observe significant differences in N digestibility among treatments, likely due to small differences in N intake or lack of precision of the measurement.
      Table 3Least squares means for feed intake and fecal output of DM and N and total-tract apparent digestibility
      ItemTreatment
      BD = basal diet; CS = 90% BD + 10% corn silage; GH = BD + grass hay; AH = BD + alfalfa hay; DDGS = BD + dried distillers grain; SH = BD + soybean hulls; BG = BD + wet brewers grain; CG = BD + corn grain.
      BDCSCGAHGHSHDDGSBGSEM
      DM
       Intake (kg/d)6.796.636.716.776.746.746.626.470.17
       Fecal output (kg/d)2.582.362.632.782.642.602.522.370.31
       Apparent digestibility (%)62.164.160.259.461.461.762.363.43.7
      N
       Intake (g/d)245.1
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      221.1
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      223.4
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      234.7
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      227.9
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      228.4
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      237.1
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      236.2
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      5.7
       Fecal output (g/d)89.574.587.8100.982.988.082.780.512.0
       Apparent digestibility (%)63.165.960.157.763.961.665.965.85.4
      CP of diets (%)22.1
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      20.8
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      20.8
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      21.7
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      21.1
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      21.2
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      22.8
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      22.8
      Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      0.2
      a–e Least squares means within a row with different superscripts are considered significantly different (P < 0.05).
      1 BD = basal diet; CS = 90% BD + 10% corn silage; GH = BD + grass hay; AH = BD + alfalfa hay; DDGS = BD + dried distillers grain; SH = BD + soybean hulls; BG = BD + wet brewers grain; CG = BD + corn grain.

      Plasma Entry Rates of Individual EAA

      The standard errors of entry rates for EAA were less than 10% of estimated values (Table 4), which is consistent with
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      . The estimated EAA entry rates were not significantly different among treatments, which is consistent with NRC prediction (Table 4) of no differences among treatments in EAA flow to the small intestine. Compared with NRC estimated duodenal digestible AA flows, the derived AA entry rates were much greater, which was also observed by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      using this prediction model. Although the NRC model estimates of EAA flow from the rumen contain as much as 50% errors of prediction (
      • Bateman 2nd, H.G.
      • Clark J.H.
      • Patton R.A.
      • Peel C.J.
      • Schwab C.G.
      Accuracy and precision of computer models to predict passage of crude protein and amino acids to the duodenum of lactating cows.
      ), they clearly are not in error by 2- or 3-fold. As discussed by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      , this likely reflected inaccurate estimates of isotope incorporation into slow-turnover body protein pools during a 2-h infusion.
      • Hanigan M.D.
      • France J.
      • Mabjeesh S.J.
      • McNabb W.C.
      • Bequette B.J.
      High rates of mammary tissue protein turnover in lactating goats are energetically costly.
      was able to describe mammary-tissue free AA, fast-turnover protein-bound AA, and slow-turnover protein-bound AA, using long-term infusions of several AA, and found that the fractional incorporation of Leu, Met, Phe, and Val into total mammary tissue protein ranged from a low of 59% per day for Met to 86% per day for Val. Lower-activity tissues such as muscle likely would have much lower rates of incorporation and would still be significant isotope sinks over several days, thus explaining the significantly greater estimates of plasma entry versus NRC-predicted duodenal digestible flow rates. For example,
      • Garlick P.J.
      • McNurlan M.A.
      • Preedy V.R.
      A rapid and convenient technique for measuring the rate of protein synthesis in tissues by injection of [3h] phenylalanine.
      reported that the fractional rates of protein synthesis in muscle of young male rats ranged from 16.9 to 21.3% per day, whereas in active tissues such as viscera synthesis rates were as high as 119.2% per day.
      • Hanigan M.D.
      • France J.
      • Mabjeesh S.J.
      • McNabb W.C.
      • Bequette B.J.
      High rates of mammary tissue protein turnover in lactating goats are energetically costly.
      also indicated that the Phe turnover rate in goat mammary glands averaged 131% per day. Such bias was expected and was removed when solving for differences between ingredients and BD (Table 4). Because all treatments had the same proportional replacement of BD, the expected entry rate coefficient for BD should represent the RUP from BD plus MCP contributions to EAA entry plus any bias associated with entry estimates due to loss of label in the slow turnover pool.
      Table 4Least squares means of plasma entry rates (g/d) for each treatment derived from isotope dilution model and digestible duodenal AA flow predicted by the
      • NRC
      Nutrient Requirements of Dairy Cattle.
      model at observed DMI
      ItemTreatment
      BD = basal diet; CS = 90% BD + 10% corn silage; GH = BD + grass hay; AH = BD + alfalfa hay; DDGS = BD + dried distillers grain; SH = BD + soybean hulls; BG = BD + wet brewers grain; CG = BD + corn grain.
      BDCSCGAHGHSHDDGSBGSEM
      LSM of plasma entry rates g/d)
       Ile1511411461421421431421385.6
       Leu2522242342242282282312269.8
       Lys2282112132112142142122068.2
       Met52485047494848472.3
       Phe103939893969697943.2
       Thr1521421481441451451441425.3
       Val2342172282142192192192148.4
      Predicted total duodenal digestible AA flow
      Total AA flow at observed DMI predicted by the NRC (2001) model.
      (g/d)
       Ile43424242424344411.5
       Leu76757674747680742.7
       Lys56555655555756541.9
       Met15151515151516150.5
       Phe45444544444547441.6
       Thr42414140414137402.4
       Val47474746464749461.6
      1 BD = basal diet; CS = 90% BD + 10% corn silage; GH = BD + grass hay; AH = BD + alfalfa hay; DDGS = BD + dried distillers grain; SH = BD + soybean hulls; BG = BD + wet brewers grain; CG = BD + corn grain.
      2 Total AA flow at observed DMI predicted by the
      • NRC
      Nutrient Requirements of Dairy Cattle.
      model.
      The plasma AA entry associated with each ingredient was derived from the dietary entry rates (Table 5), with mean standard error of the estimates of 0.37% of CP across the EAA and ingredients, which represented a relative error of 32%. The absolute error was less than the mean of 0.41% of CP reported by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      , however, because ingredients in the current work generally had lower CP content (DDGS vs. blood meal) and the relative error was greater than the 14% reported in the prior work. When relative errors (percent of SE to mean estimates) were compared across EAA, they were the greatest for Phe and Met, reflecting the low proportions of these AA in our test ingredients. When the average standard errors of estimated plasma AA entry rates were compared across ingredients, the low-CP ingredients, corn silage (49%), corn grain (45%), grass hay (46%), and soyhulls (39%), had greater standard errors than those with greater CP: alfalfa hay (23%), brewers grain (13%), and distillers grain (15%), likely due to the differences in proportions of protein contributed by test ingredients. For example, the proportion of total dietary protein contributed by each ingredient was 4.6, 5.1, 5.8, 6.4, 8.4, 12.2, and 13.1% of CP for corn silage, corn grain, grass hay, soyhulls, alfalfa hay, brewers grain, and distillers grain, respectively. The correlation between the SE of estimated AA entry rates and protein contribution of test ingredients showed that the dietary true protein proportion contributed by the test ingredient should not be less than 12.1% to obtain results with standard errors less than 15% on a relative basis.
      Table 5Plasma EAA entry rates for Ile, Leu, Lys, Met, Phe, Thr, and Val, and availability for each ingredient
      IngredientAAIngredient AA,
      AA concentrations of ingredients were from NRC (2001).
      % of CP
      Plasma AA entry, % of CPSEP > |t|
      Test of plasma AA entry different from 0.
      Plasma availability, % of ingredient AAEAA availability,
      Values calculated from AA plasma availability and AA first-pass utilization by gut tissue during absorption (Rutherfurd and Moughan, 1998; Estes et al., 2018).
      % of ingredient AA
      Corn silageIle3.341.070.530.0532.040.2
      Leu8.591.390.660.0416.218.1
      Lys2.510.960.410.0238.243.6
      Met1.530.670.310.0343.849.6
      Phe3.83
      Thr3.19
      Val4.471.020.540.0622.823.7
      Corn grainIle3.311.230.560.0337.246.7
      Leu11.21.980.69<0.0117.719.7
      Lys2.841.080.470.0338.043.4
      Met2.130.770.320.0236.241.0
      Phe4.621.590.940.0934.439.6
      Thr3.551.350.620.0338.038.0
      Val4.021.340.610.0333.334.6
      Alfalfa hayIle3.981.090.29<0.0127.434.4
      Leu7.711.740.34<0.0122.625.2
      Lys4.341.420.21<0.0132.737.3
      Met1.460.650.17<0.0144.550.4
      Phe4.89
      Thr4.11.370.31<0.0133.433.4
      Val5.011.360.30<0.0127.128.1
      Grass hayIle3.320.970.440.0329.236.7
      Leu6.221.380.50<0.0122.224.8
      Lys3.480.710.310.0220.423.3
      Met1.30.440.230.0633.838.3
      Phe3.921.340.700.0634.239.4
      Thr3.61.240.500.0234.434.4
      Val4.510.80.420.0717.718.4
      SoyhullsIle3.861.130.37<0.0129.336.8
      Leu6.52.150.45<0.0133.136.9
      Lys6.271.170.28<0.0118.721.3
      Met1.160.380.210.0732.837.2
      Phe4.331.110.620.0726.130.1
      Thr3.60.830.400.0325.025.0
      Val4.560.910.380.0220.020.8
      Dried distillers grainIle3.711.390.20<0.0137.547.1
      Leu9.595.090.24<0.0153.159.2
      Lys2.240.730.15<0.0132.637.2
      Met1.820.610.11<0.0133.537.9
      Phe4.871.870.31<0.0138.444.3
      Thr3.440.820.20<0.0123.823.8
      Val4.71.950.19<0.0141.543.1
      Brewers grainIle3.851.020.19<0.0126.533.3
      Leu9.914.980.23<0.0150.356.13
      Lys3.41.450.15<0.0142.648.63
      Met1.930.840.11<0.0143.549.3
      Phe5.571.120.29<0.0120.823.9
      Thr3.611.480.21<0.0141.041.0
      Val5.142.060.19<0.0140.141.6
      1 AA concentrations of ingredients were from
      • NRC
      Nutrient Requirements of Dairy Cattle.
      .
      2 Test of plasma AA entry different from 0.
      3 Values calculated from AA plasma availability and AA first-pass utilization by gut tissue during absorption (
      • Rutherfurd S.M.
      • Moughan P.
      The digestible amino acid composition of several milk proteins: Application of a new bioassay.
      ;
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      ).

      Individual EAA Availability from In Vivo Evaluations of Test Ingredients

      The model-derived EAA entry rates (% of CP) for Ile, Leu, Lys, Met, Phe, Thr, and Val for each ingredient were used to estimate AA availability (% ingredient AA), assuming that the loss of EAA during first pass through the splanchnic bed was the same as that reported by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      , calculated based on observed plasma AA availability of infused casein and casein AA digestibility reported by (
      • Rutherfurd S.M.
      • Moughan P.
      The digestible amino acid composition of several milk proteins: Application of a new bioassay.
      ; Table 5). The results indicated that AA availability varied across individual AA and feed ingredients, from 18.1% of ingredient AA for Leu to 49.6% for Met in corn silage; from 18.4% for Val to 39.4% for Phe in grass hay; from 25.2% for Leu to 50.4% for Met in alfalfa hay, from 23.8% for Thr to 59.2% for Leu in distillers grain; from 20.8% for Val to 27.2% for Met in soyhulls, from 23.9% for Phe to 56.1% for Leu in brewers grain, and from 19.7% for Leu to 46.7% for Ile in corn grain. Research on AA availability of these 7 feed ingredients is limited; thus, some calculations were undertaken to make direct comparisons. For example,
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      investigated the rumen degradation and intestine digestibility of AA in corn silage, corn grain, and alfalfa hay in steers using mobile bags, based on which the AA availability was calculated to vary from 12% for Met to 26% for Lys in corn grain, from 16% for Lys to 25% for Tyr in corn silage, and from 22% for Leu to 25% for Lys in alfalfa hay. Compared with current results,
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      had smaller values and variation across individual AA. The potential reason for reduced estimates might be that the nylon bags created a barrier between feedstuffs and chyme, which can cause underestimation of nutrient digestibility. In addition, failure to treat the mobile nylon bags with abomasal pepsin-HCl might also cause the lower values found by
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      . Another potential explanation for the differences is that a 12-h ruminal incubation, as used by
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      , might not reflect real rumen retention time.
      • Varvikko T.
      • Vanhatalo A.
      Intestinal nitrogen degradation of hay and grass silage estimated by the mobile bag technique.
      found that a 16-h rumen incubation was too short for forage. However, the AA availability calculated using nylon bags by
      • van Straalen W.M.
      • Odinga J.J.
      • Mostert W.
      Digestion of feed amino acids in the rumen and small intestine of dairy cows measured with nylon-bag techniques.
      ranged from 24% for Tyr to 37% for Met, which was greater than the values reported by
      • Taghizadeh A.
      • Mesgaran M.D.
      • Valizadeh R.
      • Shahroodi F.E.
      • Stanford K.
      Digestion of feed amino acids in the rumen and intestine of steers measured using a mobile nylon bag technique.
      . Other possible reasons include variation in feed sources.
      • Mjoun K.
      • Kalscheur K.F.
      • Hippen A.R.
      • Schingoethe D.J.
      Ruminal degradability and intestinal digestibility of protein and amino acids in soybean and corn distillers grains products.
      reported absorbable AA (g/kg of CP) supplied by distillers grain RUP as well as the AA composition of the ingredient. The AA availabilities were calculated to range from 19% for Ile to 40% for Phe.
      • Paz H.A.
      • Klopfenstein T.J.
      • Hostetler D.
      • Fernando S.C.
      • Castillo-Lopez E.
      • Kononoff P.J.
      Ruminal degradation and intestinal digestibility of protein and amino acids in high-protein feedstuffs commonly used in dairy diets.
      reported that AA availability varied from 14% for Lys to 31% for Leu in low-fat DDGS. Previous results showed that AA availability varied among different distillers grain sources, which was also reported by
      • Kleinschmit D.H.
      • Anderson J.L.
      • Schingoethe D.J.
      • Kalscheur K.F.
      • Hippen A.R.
      Ruminal and intestinal degradability of distillers grains plus solubles varies by source.
      . Usually grass hay is not used as a major source of protein; thus, there is limited AA digestibility data for it.
      • Borucki Castro S.I.
      • Phillip L.E.
      • Lapierre H.
      • Jardon P.W.
      • Berthiaume R.
      Ruminal degradability and intestinal digestibility of protein and amino acids in treated soybean meal products.
      observed a range in AA availability from soybean meal from 31.3% for Met to 40.4% for Thr, and from 50.2% for Val to 71.9% for Met for heat-treated soybean meal using in situ methods. However, using an in vivo method
      • Titgemeyer E.C.
      • Merchen N.R.
      • Berger L.L.
      Evaluation of soybean meal, corn gluten meal, blood meal and fish meal as sources of nitrogen and amino acids disappearing from the small intestine of steers.
      reported that the AA availability of soybean meal varied from 27.2% for His to 70.85 for Arg. The latter values are more consistent with our in vivo observations. The variance is likely caused by different techniques and feed sources. The current isotope technique was found to be accurate and unbiased by
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      using casein infusions; thus the inconsistent results from in situ and in vitro tests may indicate the inaccuracy of those evaluation methods.

      Total EAA Availability from In Vivo, In Situ, and In Vitro Evaluations of Test Ingredients

      Estimates of least squares means of total RUP-EAA availability are displayed in Table 6. The plasma EAA entry rates derived from our in vivo technique were 30.6, 27.4, 31.3, 37.2, 26.4, 37.8, and 33.5% of EAA in test ingredients for corn silage, grass hay, alfalfa hay, dried distillers grain, soyhulls, brewers grain, and corn grain, respectively. If we assume 8.27% utilization by gut tissue, EAA absorbed from the gut lumen (availability) were 33.4, 29.9, 34.1, 40.6, 28.8, 41.2, and 36.5% of EAA in test ingredients. Previous mobile bag studies found that the average TAA availability of RUP for corn silage, grass hay, alfalfa hay, dried distillers grain, soyhulls, brewers grain, and corn grain were 32.7, 28.5, 26, 52.1,26.0, 45.3, and 35.5% of CP in feed ingredients, respectively (
      • NRC
      Nutrient Requirements of Dairy Cattle.
      ;
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      ), which is similar to our in vivo results. However, the in vitro and in situ results from single feed ingredients and time points showed great variation. Compared with in vivo results, in vitro tests tended to give lower RUP digestibility for hay and higher values for other feedstuffs, which was inconsistent with previous observations (
      • Berthiaume R.
      • Lapierre H.
      • Stevenson M.
      • Coté N.
      • McBride B.W.
      Comparison of the in situ and in vivo intestinal disappearance of ruminally protected methionine.
      ;
      • Jahani-Azizabadi H.
      • Danesh Mesgaran M.
      • Valizadeh R.
      • Nassiri Moghaddam H.
      Comparison of in vivo with in situ mobile bag and three step enzymatic procedures to evaluate protein disappearance of alfalfa hay and barley grain.
      ). The potential reason is that in vitro conditions may not perfectly mimic the animal digestion system. The RUP availability from in situ tests in the current study is less than the in vivo results.
      • Berthiaume R.
      • Lapierre H.
      • Stevenson M.
      • Coté N.
      • McBride B.W.
      Comparison of the in situ and in vivo intestinal disappearance of ruminally protected methionine.
      compared in situ and in vivo methods for intestinal digestibility of rumen-protected Met and also found that in situ techniques underestimated Met availability (43.6% vs. 74.5%), which was hypothesized to be caused by the restricting contact between test feed and duodenal chyme. But this may not be the case for other amino acids, and discrepancy exists among studies.
      • Jahani-Azizabadi H.
      • Danesh Mesgaran M.
      • Valizadeh R.
      • Nassiri Moghaddam H.
      Comparison of in vivo with in situ mobile bag and three step enzymatic procedures to evaluate protein disappearance of alfalfa hay and barley grain.
      found that in vivo total-tract nitrogen disappearance was less than indicated by in situ and in vitro methods. This could be due to lack of correction factors for endogenous CP and large intestinal microbial fermentation. The variation might also be due to animal, diets, AA, or methods (
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      ). The in vivo method should be the most reliable, because all measurements occur naturally within the animal's body. Therefore, it is critical to compare non–in vivo methods with valid in vivo methods across ingredients to verify the in vitro or in situ approaches before application. However, the cost of in vivo work makes it less applicable as a commercial technique. Although
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      compared mobile bags and in vitro methods for RUP digestibility and found more variation associated with the use of mobile bags, we found that the mean for mobile bag RUP and digested RUP were similar to our estimates calculated from AA availability and thus are potentially useful for assessment of variation among sources. However, that method is subject to potential bias associated with the choice of residence time in the rumen, where appropriate times likely vary by ingredient.
      Table 6Least squares means of protein entry rates predicted from entry of Ile, Leu, Met, Lys, Phe, Thr, and Val for each ingredient, and calculated digestible RUP and digestibility of RUP for each ingredient
      IngredientPlasma EAA availability, % ingredient EAASEMRUP-EAA availability,
      Values calculated from plasma AA availability and 8.27% utilization of AA by gut tissue during absorption (Estes et al., 2018).
      % ingredient EAA
      RUP-TAA availability,
      Total AA availability of RUP from in vitro results: RUP-TAA availability (% CP) = RUP (% CP) × RUP digestibility (%)/100.
      % CP
      RUP-TAA availability,
      Total AA availability of RUP from in situ results.
      % CP
      RUP-TAA availability,
      Total AA availability of RUP calculated from RUP and its digestibility reported by White et al. (2017b).
      % CP
      Corn silage30.63.433.455.111.132.7
      Grass hay27.43.229.911.411.728.5
      Alfalfa hay31.33.434.120.611.526.0
      Dried distillers grain37.23.240.644.621.452.1
      Soyhulls26.43.228.855.917.426.0
      Brewers grain37.83.241.240.925.345.3
      Corn grain33.53.236.562.329.435.5
      1 Values calculated from plasma AA availability and 8.27% utilization of AA by gut tissue during absorption (
      • Estes K.A.
      • White R.R.
      • Yoder P.S.
      • Pilonero T.
      • Schramm H.
      • Lapierre H.
      • Hanigan M.D.
      An in vivo stable isotope–based approach for assessment of absorbed amino acids from individual feed ingredients within complete diets.
      ).
      2 Total AA availability of RUP from in vitro results: RUP-TAA availability (% CP) = RUP (% CP) × RUP digestibility (%)/100.
      3 Total AA availability of RUP from in situ results.
      4 Total AA availability of RUP calculated from RUP and its digestibility reported by
      • White R.R.
      • Kononoff P.J.
      • Firkins J.L.
      Technical note: Methodological and feed factors affecting prediction of ruminal degradability and intestinal digestibility of essential amino acids.
      .

      Future Work

      In the future, more feed ingredients can be tested using this method. To obtain results with standard errors less than 15% on a relative basis, the dietary true protein proportion contributed by the test ingredient should not be less than 12.1% of dietary CP. This will help decrease variation in the final EAA availability estimates and ensure robust entry rate derivation for the ingredient. Additional precision and reduced total entry rate bias may be achieved using an infusion time not less than 6 h. The increased observation time will also reduce the chance of entry rate variation affecting the estimates, and will improve estimates of the true plateau state, which should allow derivation of more accurate and precise estimates of true plasma AA entry rates independent of the BD and a better understanding of protein turnover in the body.
      Additionally, it may be possible to define the proportion of total EAA entry that is derived from digested MCP if microbes are labeled with 15N via ruminal ammonium sulfate infusion. Finally, the protein digestibility of feed ingredients is likely not consistent under different feeding conditions, such as very high or low CP and energy intakes (
      • Yang W.Z.
      • Beauchemin K.A.
      Grain processing, forage-to-concentrate ratio, and forage length effects on ruminal nitrogen degradation and flows of amino acids to the duodenum.
      ). In addition, ingredient source and degradability of dietary CP are also factors that may introduce variation among sources of a common ingredient (
      • Prange R.
      • Stern M.
      • Jorgensen N.
      • Satter L.
      Site and extent of protein digestion in lactating cows fed alfalfa silage or baled alfalfa hay.
      ;
      • Mabjeesh S.J.
      • Arieli A.
      • Bruckental I.
      • Zamwell S.
      • Tagari H.
      Effect of type of protein supplementation on duodenal amino acid flow and absorption in lactating dairy cows.
      ;
      • Kleinschmit D.H.
      • Anderson J.L.
      • Schingoethe D.J.
      • Kalscheur K.F.
      • Hippen A.R.
      Ruminal and intestinal degradability of distillers grains plus solubles varies by source.
      ). Therefore, additional work is required to assess the range in availabilities from different sources of an ingredient with different feeding conditions (e.g., high and low forage), and to further evaluate in situ and in vitro methods, compared with in vivo measurement, if we are to develop a real-time system that can be used by industry.

      CONCLUSIONS

      We observed EAA availability for corn silage, grass hay, alfalfa hay, distillers grain, soyhulls, brewers grain, and corn grain of 33.4, 29.9, 34.1, 40.6, 28.8, 41.2, and 36.5% of ingredient EAA, respectively, assuming 8.27% utilization by gut tissue. Although the general trend (availability of forage and byproducts lower than availability of grains) was consistent, compared with in vivo results, in vitro evaluations underestimated RUP availability of hay but overestimate other feedstuffs, whereas in situ methods underestimated RUP availability of all test ingredients. The average RUP availability derived from meta-analysis of mobile bag results are representative and can be used to evaluate variations among sources, but the availability of individual AA from in situ or in vitro vary less compared with in vivo values. Therefore, in vivo studies are necessary to build a matrix of EAA availabilities for representative ingredients that can be used in nutritional models.

      ACKNOWLEDGMENTS

      The authors acknowledge The Institute for Feed Education and Research, American Feed Industry Association (Arlington, VA) for funding this project. Huang was partially supported by the China Scholarship Council (Beijing, China).

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