ABSTRACT
Key words
INTRODUCTION

MATERIALS AND METHODS
Samples and Dilutions
Listeria monocytogenes
Hazard | Target | Oligonucleotide (F, forward; R, reverse) | PCR | Reference | ||||
---|---|---|---|---|---|---|---|---|
Denaturation | Annealing | Extension | Product (bp) | Positive control | ||||
Listeria spp. | prs | F: GCTGAAGAGATTGCGAAAGAAG | 95°C, 1 min | 53°C, 1 min | 72°C, 1 min 15 s | 370 | L. monocytogenes ATCC 49494 | Doumith et al., 2004 |
R: CAAAGAAACCTTGGATTTGCGG | ||||||||
Listeria monocytogenes | hly | F: GCCTGCAAGTCCTAAGACGCCAATC | 95°C, 40 s | 62°C, 1 min | 72°C, 1 min | 706 | L. monocytogenes ATCC 49494 | Hudson et al., 2001 |
R: CTTGCAACTGCTCTTTAGTAACAGC | ||||||||
Salmonella spp. | invA | F: TTGTTACGGCTATTTTGACCA | 95°C, 20 s | 42°C, 20 s | 72°C, 30 s | 521 | SalmonellaEnteritidis ATCC 13076 | Swamy et al., 1996 |
R: CTGACTGCTACCTTGCTGATG | ||||||||
Coagulase- positive staphylococci | nuc | F: TGCTATGATTGTGGTAGCCATC | 95°C, 30 s | 55°C, 30 s | 72°C, 30 s | 420 | Staphylococcus aureus ATCC 8095 | Baron et al., 2004 |
R: TCTCTAGCAAGTCCCTTTTCCA | ||||||||
rep-PCR | TCGCTCAAAACAACGACACC | 95°C, 1 min | 54°C, 1 min | 72°C, 2 min | — | — | Del Vecchio et al., 1995 | |
sea | F: ACGATCAATTTTTACAGC | 95°C, 45 s | 46.2°C, 45 s | 72°C, 30 s | 544 | Staph. aureus ATCC 8095 | Rosec and Gigaud, 2002 | |
R: TGCATGTTTTCAGAGTTAATC | ||||||||
seb | F: GAATGATATTAATTCGCATC | 95°C, 45 s | 46.2°C, 45 s | 72°C, 30 s | 416 | Staph. aureus ATCC 12588 | Rosec and Gigaud, 2002 | |
R: TCTTTGTCGTAAGATAAACTTC | ||||||||
sec | F: GACATAAAAGCTAGGAATTT | 95°C, 45 s | 46.2°C, 45 s | 72°C, 30 s | 257 | Staph. aureus ATCC 14458 | Rosec and Gigaud, 2002 | |
R: AAATCGGATTAACATTATCCA | ||||||||
sed | F: TTACTAGTTTGGTAATATCTCCTT | 95°C, 45 s | 46.2°C, 45 s | 72°C, 30 s | 334 | Staph. aureus FRI 326 | Rosec and Gigaud, 2002 | |
R: CCACCATAACAATTAATGC | ||||||||
see | F: ATAGATAAAGTTAAAACAAGCAA | 95°C, 45 s | 46.2°C, 45 s | 72°C, 30 s | 702 | Staph. aureus FRI 196 | Rosec and Gigaud, 2002 | |
R: TAACTTACCGTGGACCC | ||||||||
Diarrheagenic Escherichia coli | eae | F: CCCGAATTCGGCACAAGCATAAGC | 95°C, 30 s | 52°C, 30 s | 72°C, 30 s | 881 | E. coli wild strain | Toma et al., 2003 |
R: CCCGGATCCGTCTCGCCAGTATTCG | ||||||||
stx | F: TGATGATGGCAATTCAGTAT | 95°C, 30 s | 52°C, 30 s | 72°C, 30 s | 518 | E. coli ATCC 43895 | Toma et al., 2003 | |
R: GAGCGAAATAATTTATATGTG | ||||||||
agg | F: GTATACACAAAAGAAGGAAGC | 95°C, 30 s | 52°C, 30 s | 72°C, 30 s | 253 | E. coli wild strain | Aranda et al., 2007
Single multiplex assay to identify simultaneously enteropathogenic, enteroaggregative, enterotoxigenic, enteroinvasive and Shiga toxin-producing Escherichia coli strains in Brazilian children. FEMS Microbiol. Lett. 2007; 267 (17328113): 145-150 | |
R: ACAGAATCGTCAGCATCAGC | ||||||||
ipaH | F: GTTCCTTGACCGCCTTTCCGATACCGTC | 95°C, 30 s | 52°C, 30 s | 72°C, 30 s | 600 | E. coli ATCC 43893 | Aranda et al., 2007
Single multiplex assay to identify simultaneously enteropathogenic, enteroaggregative, enterotoxigenic, enteroinvasive and Shiga toxin-producing Escherichia coli strains in Brazilian children. FEMS Microbiol. Lett. 2007; 267 (17328113): 145-150 | |
R: GCCGGTCAGCCACCCTCTGAGAGTAC | ||||||||
Brucella abortus | IS711 | F: GAGAATAAAGCCAACACCCG | 95°C, 30 s | 58°C, 30 s | 72°C, 30 s | 317 | DNA from B. abortus DDB/2018/1306T1, wild strain | Ning et al., 2012 |
R: GATGGACGAAACCCACGAAT | ||||||||
Mycobacterium tuberculosis | IS6110 | F: CGTGAGGGCATCGAGGTGGC | 94°C, 1 min | 68°C, 1 min | 72°C, 1 min | 500 | DNA from M. tuberculosis H37RO.CRNC25, wild strain | de Souza Figueiredo et al., 2009 |
R: GCGTAGGCGTCGGTGACAAA |
Salmonella spp
Coagulase-Positive Staphylococci and Classical Staphylococcal Enterotoxins
- ISO
- ISO
Molecular Detection of Diarrheagenic E. coli, B. abortus, and M. tuberculosis
- Aranda K.R.S.
- Fabbricotti S.H.
- Fagundes-Neto U.
- Scaletsky I.C.A.
Data Analysis
RESULTS
Category | Count (cfu/g) | SAC | P-value | |
---|---|---|---|---|
Pingo | Rala | |||
Contamination level | <100 | 3 | 9 | 0.576 |
100 to 1,000 | 0 | 1 | 1.000 | |
1,000 to 10,000 | 0 | 6 | 0.239 | |
10,000 to 100,000 | 2 | 17 | 0.749 | |
>100,000 | 3 | 12 | 0.850 | |
Gerais, 2002a | >1,000 | 5 | 35 | 0.664 |
European Union, 2005 | >100,000 | 3 | 12 | 0.850 |
DISCUSSION
- Torres-Vitela M.R.
- Mendoza-Bernardo M.
- Castro-Rosas J.
- Gomez-Aldapa C.A.
- Garay-Martinez L.E.
- Navarro-Hidalgo V.
- Villarruel-López A.
- Farrokh C.
- Jordan K.
- Auvray F.
- Glass K.
- Oppegaard H.
- Raynaud S.
- Thevenot D.
- Condron R.
- De Reu K.
- Govaris A.
- Heggum K.
- Heyndrickx M.
- Hummerjohann J.
- Lindsay D.
- Miszczycha S.
- Moussiegt S.
- Verstraete K.
- Cerf O.
- Brasil
- Silva J.
- Moraes C.M.
- Silva C.L.
- Sales G.A.
- Keid L.B.
- Matos P.C.M.
- Lara A.P.S.S.
- Moraes C.C.G.
- Ciupescu L.-M.
- Auvray F.
- Nicorescu I.M.
- Meheut T.
- Ciupescu V.
- Lardeux A.-L.
- Tanasuica R.
- Hennekinne J.-A.
- Carfora V.
- Caprioli A.
- Marri N.
- Sagrafoli D.
- Boselli C.
- Giacinti G.
- Giangolini G.
- Sorbara L.
- Dottarelli S.
- Battisti A.
- Amatiste S.
CONCLUSIONS
ACKNOWLEDGMENTS
Supplementary Materials
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