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Research| Volume 103, ISSUE 9, P7908-7926, September 2020

Brazilian artisanal cheeses are rich and diverse sources of nonstarter lactic acid bacteria regarding technological, biopreservative, and safety properties—Insights through multivariate analysis

Open AccessPublished:July 16, 2020DOI:https://doi.org/10.3168/jds.2020-18194

      ABSTRACT

      In this study a total of 220 isolates of lactic acid bacteria (LAB) recovered from 10 types of Brazilian artisanal cheeses marketed in 4 main regions of Brazil were evaluated regarding their safety and ability to produce diacetyl (a precursor of aromatic compounds), exopolysaccharides (EPS; from different sugar sources), and antagonistic activity against Listeria monocytogenes and Staphylococcus aureus. The results indicated that 131 isolates (59.6%) were classified as strong (40.5%) and moderate (19.1%) diacetyl producers; 28 isolates (12.7%) stood out due to their remarkable production of EPS from different sugars, including sucrose (3.2%), fructose (2.3%), lactose (2.3%), and glucose (6%). Furthermore, 94.1% and 95.9% of isolates presented antagonistic activity against S. aureus and L. monocytogenes, respectively, even though only 27 isolates (12.3%) exhibited positive results in the bacteriocin production test. None of the isolates tested presented hemolytic activity, and 117 were classified as safe, due to their intrinsic resistance to a maximum of 4 different antibiotics. The data obtained for assessment of antibiogram profile and technological potential (moderate and high production of diacetyl, EPS, and bacteriocins) were submitted to a multiple correspondence analysis to correlate them with the cheese of isolation. Regarding the antimicrobial profile of LAB strains, it was possible to verify an association between isolates from Minas artisanal cheeses from Araxá and resistance to tetracycline; Minas artisanal cheeses from Serro and resistance to erythromycin; Coalho and Minas artisanal cheese from Cerrado and resistance to penicillin; and isolates from Serrano and Colonial cheeses with clindamycin and ceftazidime resistance. Although the susceptibility of strains to these antibiotics was considered high (71.8–80.5%), these data may be related to the horizontal transfer of genes in the production chain of these cheeses. Results of multiple correspondence analysis also showed that isolates with antagonistic activity were mostly isolated from Manteiga, Colonial, and Coalho cheeses. The isolates with high or moderate EPS-producer ability from sucrose, glucose, and fructose were mainly associated with Minas artisanal cheeses from Cerrado. In contrast, isolates with high or moderate EPS-producer ability from lactose were isolated from Serrano, Minas artisanal cheeses from Canastra, and Campo das Vertentes microregions. Finally, isolates from Minas artisanal cheeses (from Araxá microregion), Coalho, and Caipira cheeses were associated with moderate/high diacetyl production. To the best of the authors' knowledge, this study provides, for the first time, data indicating that the dominant technological, biopreservative, and safety properties of LAB isolates can be correlated with the type of Brazilian artisanal cheeses, which denotes its singularity. This knowledge is of utmost relevance for the development of starter or adjunct cultures with tailored properties.

      Key words

      INTRODUCTION

      Brazilian artisanal cheeses (BAC) have a relevant historical, socio-economic, and cultural importance for traditional Brazilian communities. Brazilian artisanal cheeses are distinguished by their secular tradition in manufacturing, which is passed from one generation to another, keeping their unique features when compared with industrialized products. Presence of a specific endogenous microbiota in each production region confers cheeses distinct organoleptic characteristics of aroma, flavor, and color, which are much appreciated by the local population and have drawn the attention of researchers and industries since the food product is considered a rich source of microorganisms with a remarkable biotechnological and functional potential to be exploited (
      • Bozoudi D.
      • Kotzamanidis C.
      • Hatzikamari M.
      • Tzanetakis N.
      • Menexes G.
      • Litopoulou-Tzanetaki E.
      A comparison for acid production, proteolysis, autolysis and inhibitory properties of lactic acid bacteria from fresh and mature Feta PDO Greek cheese, made at three different mountainous areas.
      ;
      • Agostini C.
      • Eckert C.
      • Vincenzi A.
      • Machado B.L.
      • Jordon B.C.
      • Kipper J.P.
      • Dullius A.
      • Dullius C.H.
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      • Sperotto R.A.
      • Pozzobon A.
      • Granada C.E.
      • Maciel M.J.
      • Volken de Souza C.F.
      Characterization of technological and probiotic properties of indigenous Lactobacillus spp. from south Brazil.
      ;
      • Campagnollo F.B.
      • Margalho L.P.
      • Kamimura B.A.
      • Feliciano M.D.
      • Freire L.
      • Lopes L.S.
      • Alvarenga V.O.
      • Cadavez V.A.P.
      • Gonzales-Barron U.
      • Schaffner D.W.
      • Sant'Ana A.S.
      Selection of indigenous lactic acid bacteria presenting anti-listerial activity, and their role in reducing the maturation period and assuring the safety of traditional Brazilian cheeses.
      ;
      • Kamimura B.
      • Magnani M.
      • Luciano W.A.
      • Campagnollo F.B.
      • Pimentel T.C.
      • Alvarenga V.O.
      • Pelegrino B.O.
      • Cruz A.G.
      • Sant'Ana A.S.
      Brazilian artisanal cheeses: An overview of their characteristics, main types and regulatory aspects.
      ,
      • Kamimura B.A.
      • De Filippis F.
      • Sant'Ana A.S.
      • Ercolini D.
      Large-scale mapping of microbial diversity in artisanal Brazilian cheeses.
      ). This biodiversity encompasses yeasts, fungi, and mainly lactic acid bacteria (LAB) originated from raw milk and a manufacturing environment (e.g., utensils, food handlers, and insects). Specifically, for artisanal cheeses made in the state of Minas Gerais, the biodiversity also originates from an endogenous culture known as “pingo.” Pingo is characterized as a portion of the fermented whey originated from the drainage process of cheeses produced in the previous day and collected in containers to be used as a starter in the production of the following day (
      • de Souza J.V.
      • Dias F.S.
      Protective, technological, and functional properties of select autochthonous lactic acid bacteria from goat dairy products.
      ;
      • Campagnollo F.B.
      • Margalho L.P.
      • Kamimura B.A.
      • Feliciano M.D.
      • Freire L.
      • Lopes L.S.
      • Alvarenga V.O.
      • Cadavez V.A.P.
      • Gonzales-Barron U.
      • Schaffner D.W.
      • Sant'Ana A.S.
      Selection of indigenous lactic acid bacteria presenting anti-listerial activity, and their role in reducing the maturation period and assuring the safety of traditional Brazilian cheeses.
      ;
      • Bachtarzi N.
      • Kharroub K.
      • Ruas-Madiedo P.
      Exopolysaccharide-producing lactic acid bacteria isolated from traditional Algerian dairy products and their application for skim-milk fermentations.
      ;
      • Kamimura B.
      • Magnani M.
      • Luciano W.A.
      • Campagnollo F.B.
      • Pimentel T.C.
      • Alvarenga V.O.
      • Pelegrino B.O.
      • Cruz A.G.
      • Sant'Ana A.S.
      Brazilian artisanal cheeses: An overview of their characteristics, main types and regulatory aspects.
      ).
      Lactic acid bacteria are widely distributed in nature and can be isolated from several food products of animal and plant origin, and also from the human gastrointestinal tract, which allows them to be recognized as having a generally recognized as safe (GRAS) status. The predominance of this group of bacteria in comparison with others is related to their unique metabolism in fermentative processes. This metabolism involves the synthesis of organic acids (lactic, acetic, and propionic acids) and pH reduction, production of antimicrobial compounds (such as bacteriocins, hydrogen peroxide, diacetyl, CO2, and so on), and leading to inhibition of undesirable microorganisms in foods, acting as biopreservative agents. In addition to its antimicrobial potential, diacetyl (2,3-butanedione) also plays a key role in the development of distinctive buttery flavor notes in foods, is naturally found in cheeses, butter, and dairy products (
      • Li X.
      • Duerkop A.
      • Wolfbeis O.S.
      A fluorescent probe for diacetyl detection.
      ;
      • Joković N.
      • Rajković J.
      • Veljović K.
      • Tolina M.
      • Topisirović L.
      Screening of lactic acid bacteria isolated from Serbian kajmak for use in starter cultures.
      ). This compound is synthesized by LAB metabolism of citrate (e.g., Lactobacillus, Streptococcus, Lactococcus, and Bacillus) utilizing glucose, lactose, and other carbon sources as substrates (
      • Rincon-Delgadillo M.I.
      • Lopez-Hernandez A.
      • Wijaya I.
      • Rankin S.A.
      Diacetyl levels and volatile profiles of commercial starter distillates and selected dairy foods.
      ). Taking into account that food aroma is an important attribute in food acceptability, many industries and researchers have been seeking for new sources of LAB able to produce such volatile compounds and apply them as starter ingredients in dairy foods (
      • Rincon-Delgadillo M.I.
      • Lopez-Hernandez A.
      • Wijaya I.
      • Rankin S.A.
      Diacetyl levels and volatile profiles of commercial starter distillates and selected dairy foods.
      ;
      • Clark S.
      • Winter C.K.
      Diacetyl in foods: A review of safety and sensory characteristics.
      ).
      Furthermore, some LAB species, known as nonstarter lactic acid bacteria, also play a fundamental role in the development of aroma and texture during the ripening process of cheeses, contributing to their quality and identity patterns (
      • Kamimura B.A.
      • De Filippis F.
      • Sant'Ana A.S.
      • Ercolini D.
      Large-scale mapping of microbial diversity in artisanal Brazilian cheeses.
      ;
      • Cuffia F.
      • Bergamini C.V.
      • Hynes É.R.
      • Wolf I.V.
      • Perotti M.C.
      Evaluation of autochthonous cultures to improve the cheese flavor: A case study in hard cheese model.
      ). These characteristics include their proteolytic and lipolytic systems, in addition to their production of exopolysaccharides (EPS) as a defense mechanism under stressful conditions, protecting these microorganisms against desiccation and bacteriophage attack (
      • Giraffa G.
      Selection and design of lactic acid bacteria probiotic cultures.
      ;
      • Bintsis T.
      Lactic acid bacteria as starter cultures: An update in their metabolism and genetics.
      ;
      • Pereira G.V.D.M.
      • Neto D.P.D.C.
      • Junqueira A.C.D.O.
      • Karp S.G.
      • Letti L.A.J.
      • Júnior A.I.M.
      • Soccol C.R.
      A review of selection criteria for starter culture development in the food fermentation industry.
      ). Exopolysaccharides produced by LAB are essential due to their ability to form highly viscous solutions, even at low concentrations, and their pseudoplastic nature, contributing to texture and rheology of foods, which are attributes much appreciated by consumers. In cheeses, EPS links water molecules present in the complex structure of the casein network, interacting with proteins and micelles found in milk, strengthening the structure of milk curd, and reducing syneresis during the first step of acidification and coagulation present in the cheese-manufacturing process. According to sugar composition, EPS can be divided into homopolysaccharides and heteropolysaccharides. Homopolysaccharides are composed of only one type of monosaccharide, whereas heteropolysaccharides are composed of 2 to 8 repeated types of monosaccharides. Thus, in addition to rheological attributes, EPS produced by LAB can be used as sources of oligosaccharides and sugar monomers, prebiotics, nutraceuticals, sweeteners, and humectants, among others (
      • Duboc P.
      • Mollet B.
      Applications of exopolysaccharides in the dairy industry.
      ;
      • Sanalibaba P.
      • Cakmak G.A.
      Exopolysaccharides production by lactic acid bacteria.
      ).
      Studies regarding isolation of autochthonous LAB and their further application as starter or adjunct cultures in the production of cheeses have intensified in recent years and aimed to reproduce peculiar sensorial features of traditional cheeses in a safer manner, contributing to their recognition in terms of geographic location. Moreover, the use of LAB in foods as biopreservative agents by bacteriocin production has become an essential trend due to their higher efficacy in comparison with artificial preservatives, which helps to extend shelf life and to suppress the growth of pathogens in dairy products. Bacteriocins, by definition, are generally low molecular weight proteins or protein complexes, which are synthesized by bacterial ribosomes and are active against genetically closely related microorganisms. Their inhibitory activity is related to pore formation in the bacterial membrane, DNA degradation, and inhibition of peptidoglycan synthesis, among others (
      • De Pasquale I.
      • Di Cagno R.
      • Buchin S.
      • De Angelis M.
      • Gobbetti M.
      Use of autochthonous mesophilic lactic acid bacteria as starter cultures for making Pecorino Crotonese cheese: Effect on compositional, microbiological and biochemical attributes.
      ;
      • Pereira G.V.D.M.
      • Neto D.P.D.C.
      • Junqueira A.C.D.O.
      • Karp S.G.
      • Letti L.A.J.
      • Júnior A.I.M.
      • Soccol C.R.
      A review of selection criteria for starter culture development in the food fermentation industry.
      ;
      • Skariyachan S.
      • Govindarajan S.
      Biopreservation potential of antimicrobial protein producing Pediococcus spp. towards selected food samples in comparison with chemical preservatives.
      ;
      • Todorov S.D.
      What bacteriocinogenic lactic acid bacteria do in the milk?.
      ).
      Despite their GRAS status and all associated benefits, some food-grade LAB belonging to Lactobacillus, Lactococcus, and Bifidobacterium genera have been involved in some rare nosocomial infections (e.g., sepsis, bacteremia, endocarditis) in immunocompromised patients, mostly due to their displacement from the gut lumen to blood (
      • Peivasteh-Roudsari L.
      • Pirhadi M.
      • Karami H.
      • Tajdar-oranj B.
      • Molaee-Aghaee E.
      • Sadighara P.
      Probiotics and food safety: An evidence-based review.
      ;
      • Pradhan D.
      • Mallappa R.H.
      • Grover S.
      Comprehensive approaches for assessing the safety of probiotic bacteria.
      ). Even if this infection rate is less than 0.5% (
      • Peivasteh-Roudsari L.
      • Pirhadi M.
      • Karami H.
      • Tajdar-oranj B.
      • Molaee-Aghaee E.
      • Sadighara P.
      Probiotics and food safety: An evidence-based review.
      ), it is of great concern to evaluate the safe use of new strains, especially wild LAB, which has no history of safe use, before introducing them into the food chain. There is still no consensus by regulatory bodies regarding the criteria used to assess the safety of microorganisms to be applied in food, whether as starters or as probiotics (
      • Pradhan D.
      • Mallappa R.H.
      • Grover S.
      Comprehensive approaches for assessing the safety of probiotic bacteria.
      ). Nevertheless, among these criteria, antibiotic resistance and hemolytic activity are of great concern, as they are associated with the ability to transfer antibiotic resistance genes to other bacteria (including pathogens) and the ability to lyse red blood cell, thus affecting the immune system of the host, respectively. These 2 features represent a risk to public health (
      • Ambalam P.
      • Ramoliya J.
      • Dave J.
      • Vyas B.
      Safety assessment of potential probiotic strains Lactobacillus rhamnosus 231 and Lactobacillus rhamnosus V92 in mouse model.
      ;
      • Colombo M.
      • Todorov S.D.
      • Eller M.
      • Nero L.A.
      The potential use of probiotic and beneficial bacteria in the Brazilian dairy industry.
      ). The indiscriminate use of antibiotics in human and veterinary medicine has increased the number of resistant microorganisms, making the treatment of microbial infections increasingly challenging.
      Thus, this study aimed to evaluate EPS production from different sugar sources (lactose, sucrose, fructose, and glucose), diacetyl formation as a precursor of aromatic compounds, and bacteriocinogenic activity of 220 autochthonous Lactobacillus sp. isolates. The strains were obtained from BAC marketed in 4 main regions of the country to assess their biotechnological and biopreservative potential for application in healthier foods, which will also exhibit geographical features, by use of a multivariate analysis. The microorganisms' susceptibility to antibiotics and the presence of hemolysins were also evaluated to guarantee the safety of possibly new dairy fermented products for human consumption.

      MATERIALS AND METHODS

      LAB Isolates

      A total of 220 LAB isolates were obtained from BAC, including samples of Minas artisanal cheeses from Araxá (n = 16), Campo das Vertentes (n = 36), Canastra (n = 22), Cerrado (n = 2), and Serro (n = 23) microregions of Southeast region; Coalho (n = 53) and Manteiga (n = 8), from Northeast region; Caipira (n = 39), from Center-West region; and Colonial (n = 12) and Serrano (n = 9), from South region. These isolates were chosen from a total of 1,002 LAB analyzed in a previous study (
      • Margalho L.P.
      Bioprospection of technological, probiotic potential and safety assessment of endogenous lactic acid bacteria isolated from Brazilian artisanal cheeses.
      ), due to their high performance in technological tests: extracellular lipolytic and proteolytic enzyme production (
      • Sahraoui Y.
      • Fayolle K.
      • Leriche F.
      • Le Flèche-Matéos A.
      • Sadoun D.
      Antibacterial and technological properties of Lactococcus lactis ssp. lactis KJ660075 strain selected for its inhibitory power against Staphylococcus aureus for cheese quality improving.
      ), growth in the presence of NaCl, bile salts, and low pH values (
      • Guo X.H.
      • Kim J.M.
      • Nam H.M.
      • Park S.Y.
      • Kim J.M.
      Screening lactic acid bacteria from swine origins for multistrain probiotics based on in vitro functional properties.
      ). The identification of strains was performed using the MALDI-TOF MS Biotyper (Bruker Daltonik GmbH, Bremen, Germany), according to
      • Klūga A.
      • Terentjeva M.
      • Kántor A.
      • Kluz M.
      • Puchalski C.
      • Kačániová M.
      Antibacterial Activity of Melissa officinalis L., Mentha piperita L., Origanum vulgare L. and Malva mauritiana against bacterial microflora isolated from fish.
      . All isolates were kept frozen (−80°C) in de Man, Rogosa, and Sharpe (MRS) broth (Merck, Darmstadt, Germany) added with 20% (vol/vol) of glycerol (Sigma, St. Louis, MO).

      Biotechnological Properties

      Diacetyl Production

      Evaluation of aromatic compound production (particularly for diacetyl) by LAB was carried out according to
      • King N.
      Modification of Voges-Proskauer test for rapid colorimetric determination of acetyl methyl carbimol plus diacetyl in butter.
      . Thus, LAB isolates from frozen stocks were inoculated (1%) in MRS broth (Merck, Darmstadt, Germany) and subcultured twice during 16 h at 30°C (∼108 cfu/mL) to guarantee actively growing cells. After growth, they were centrifuged (Sorvall Legend XTR, Thermo Scientific, Germany) at 4,000 × g and 5°C for 15 min. Pellets obtained were resuspended in peptone water, inoculated (∼106 cfu/mL) in 10 mL of UHT whole milk (1%, vol/vol), and incubated at 30°C for 24 h. Following this, 1 mL of microbial culture was added with 0.5 mL of 1% (wt/vol) α-naphthol solution plus 0.5 mL of 16% (wt/vol) sodium hydroxide solution and incubated at 37°C for 10 min. Diacetyl production was indicated by the formation of a pinkish ring in tubes and classified as weak, medium, or strong according to intensity of ring color developed based on the modified colorimetric test of Voges-Proskauer (
      • King N.
      Modification of Voges-Proskauer test for rapid colorimetric determination of acetyl methyl carbimol plus diacetyl in butter.
      ).

      EPS Production

      The EPS evaluation was performed according to
      • Jaouani I.
      • Abbassi M.S.
      • Ribeiro S.C.
      • Khemiri M.
      • Mansouri R.
      • Messadi L.
      • Silva C.C.G.
      Safety and technological properties of bacteriocinogenic enterococci isolates from Tunisia.
      . The LAB isolates were grown overnight in MRS broth and then streaked on the surface of plates containing modified MRS agar, which was added (5%, wt/vol) with the following carbon sources: glucose, sucrose, fructose, and lactose, separately. Incubation was carried out at 30°C for 48 to 72 h and isolates that produced slimy and ropy colonies (assessed by touching the colony with an inoculation loop) were considered positive for EPS production and then classified in terms of maximum filament stretching of polymer produced by LAB in high (>5 mm), moderate (2–5 mm), and weak (<2 mm) EPS producers.

      Antagonistic Activity and Assessment of Bacteriocin-Like Substances

      The antagonistic activity was determined, according to
      • Harris L.J.
      • Daeschel M.A.
      • Stiles M.E.
      • Klaenhammer T.R.
      Antimicrobial activity of lactic acid bacteria against Listeria monocytogenes.
      , by the use of the well-diffusion assay. According to this assay, a halo of inhibition is observed around LAB colonies, indicating that pathogen growth was suppressed. For this test, 5 μL of LAB cultures previously grown overnight in MRS broth was added to the surface of plates containing MRS agar and incubated at 30°C for 18 h. Next, 10 mL of semi-solid brain heart infusion (BHI; 0.85% agar, wt/wt) containing 106 cfu/mL of the target pathogen was poured on top of plates and incubated at 37°C for 24 h. Pathogenic Staphylococcus aureus ATCC 19095 and Listeria monocytogenes ATCC 7644 were used for this initial screening.
      For evaluation of bacteriocin(s) production, LAB isolates presenting antilisterial and antistaphylococcal activity were grown in MRS broth at 30°C for 24 h and centrifuged at 4,000 × g and 4°C for 15 min (Sorvall Legend XTR, Thermo Scientific, Berlin, Germany). Cell-free supernatant (CFS) was collected, and pH adjusted to 6 to 6.5 using 1 N NaOH. Following this, CFS was thermally treated (70°C for 30 min) and filter-sterilized using 0.22-μm membranes. Antilisterial and antistaphylococcal activity of supernatant was evaluated using the spot-on-the-lawn method with modifications (
      • van Reenen C.A.
      • Dicks
      • Chikindas
      Isolation, purification and partial characterization of plantaricin 423, a bacteriocin produced by Lactobacillus plantarum.
      ). Thus, 10-µL aliquots from CFS were placed on the surface of plates containing 10 mL of bacteriological agar (1.5%, wt/vol) and covered with an overlay consisting of 5 mL of semi-solid BHI added with 106 cfu/mL of the target pathogen. Plates were incubated at 37°C for 24 h and observed for halo formation. Confirmation of bacteriocin production was carried out by evaluation of the proteinaceous nature of the antimicrobial compound. For this test, CFS was treated (1 h at 37°C) with the following proteolytic enzymes: α-chymotrypsin type II from bovine pancreas, protease type XIV from Streptomyces griseus, trypsin, and proteinase K (all purchased from Sigma-Aldrich, St. Louis, MO) solubilized in 20 mM (pH 7.0) phosphate buffer. After treatment, CFS was heated at 90°C for 5 min to inactivate enzymes and tested by the spot-on-the-lawn method as described above to assess residual antimicrobial activity against S. aureus and L. monocytogenes strains. The absence of halo formation after the performance of enzymatic treatment indicated the presence of bacteriocins. The following foodborne pathogens were tested in the bacteriocin test: enterotoxin-producing S. aureus FRI S6, S. aureus FRI 361, L. monocytogenes ATCC 3968 (serotype 1/2b), and L. monocytogenes ATCC 3973 (serotype 4b). All strains were kindly donated by Oswaldo Cruz Foundation (Rio de Janeiro, RJ, Brazil). Each strain was separately grown in BHI broth at 37°C for 24 h, centrifuged (4,000 × g; 4°C; 15 min), and washed 2 times in PBS (Merck, Darmstadt, Germany). The concentration of cells in the suspensions was adjusted to 0.5 McFarland (∼108 cfu/mL) and diluted 100× to have a final concentration of 106 cfu/mL for the tests.

      Safety Evaluation

      Antibiogram

      Antibiogram analysis was performed in duplicates, with 3 replicates each, according to the antimicrobial susceptibility disk diffusion method with modifications (
      • Charteris W.P.
      • Kelly H.P.M.
      • Morelli L.
      • Collins J.K.
      Antibiotic susceptibility of potentially probiotic Lactobacillus species.
      ). The LAB isolates were previously cultivated in MRS broth. Bacterial cells were collected and washed in PBS. Pellet was transferred to tubes containing 3.5 mL of sterilized saline solution (NaCl 0.85%, wt/vol) to reach 0.5 in the McFarland scale (108 cfu/mL). Then, sterilized swabs were used to inoculate the microorganisms on top of plates containing MRS agar. Afterward, disks (all purchased from Cecon, São Paulo, SP, Brazil) containing the antimicrobials ceftazidime (30 µg), clindamycin (2 µg), ciprofloxacin (5 µg), erythromycin (5 µg), gentamicin (10 µg), oxacillin (1 µg), penicillin (10 U), streptomycin (30 µg), tetracycline (30 µg), and vancomycin (30 µg) were placed on surface plates, which were then incubated at 37°C for 24 h. As a quality control for disks, Escherichia coli ATCC 25922 was used. Diameters of inhibition halos were measured, and microorganisms were qualitatively classified as sensitive, moderately sensitive, or resistant against antimicrobials tested, according to the recommendation of the Clinical and Laboratory Standards Institute (
      • CLSI
      Performance Standards for Antimicrobial Susceptibility Testing; Twenty-Second Informational Supplement. CLSI document M100–S22.
      ).

      Hemolysis

      For evaluation of hemolytic activity, LAB isolates (n = 220) were grown overnight in MRS broth, inoculated onto blood agar (sheep blood added at 7%, vol/vol), and incubated at 37°C for 48 h, following manufacturer's instructions (Labcenter, Campinas, Brazil). Isolates that exhibited greenish halos around colonies (α-hemolysis) or produced no inhibition halo (γ-hemolysis) were classified as nonhemolytic. Alternatively, isolates that produced bright halos around colonies (β-hemolysis) were classified as hemolytic.

      Statistical Analyses

      Semi-qualitative data obtained for biotechnological potential (production of EPS, diacetyl, and bacteriocins) and safety evaluation (antibiogram and hemolytic activity) were analyzed using multiple correspondence analysis (MCA) and software PAST v. 3.26 (
      • Hammer Ø.
      • Harper D.A.T.
      • Ryan P.D.
      PAST: Paleontological Statistics software package for education and data analysis.
      ) to assess the effect of cheese type/region of isolation on the performance of LAB. Isolates that were sensitive to less than 4 antibiotics tested were selected for principal component analysis (PCA) using Pirouette 3.11 software (Infometrix, Bothell, WA) to select the groups with the best (most promising) results for use in foods. Data obtained were converted into codes (3, 2, 1, and 0 for high, moderate, weak, and nonproducers of EPS, diacetyl, and bacteriocin, respectively) and used as input data.

      RESULTS

      Isolation and Identification of LAB

      Among 220 LAB isolates that presented good technological potential [reported in a previous study performed by our research group (unpublished data)], only 179 were identified at the species level, and 41 were classified as belonging to Lactobacillus genus (as described in Supplemental Table S1, https://doi.org/10.3168/jds.2020-18194). Figure 1 shows the total number of LAB isolates, their identification at the species level, and distribution per type of cheese/region.
      Figure thumbnail gr1
      Figure 1Lactic acid bacteria diversity determined in different types of Brazilian artisanal cheeses: Caipira, Coalho, Coalho Light, Manteiga, Minas artisanal (from Araxá, Canastra, Campo das Vertentes, Serro, and Cerrado microregions), Serrano and Colonial, obtained from 4 main regions (Center-West, Northeast, Southeast, and South) of the country and expressed as number (n) of isolates and respective percentages (%) for each species determined presenting technological potential.
      As shown in Figure 1, Lactobacillus plantarum was the most frequently isolated species from artisanal cheeses evaluated (47.7%), followed by Lactobacillus brevis (16.4%), Lactobacillus paracasei (9.1%), Lactococcus lactis (2.7%), Lactobacillus rhamnosus (2.3%), Pediococcus pentosaceus (0.9%), Lactobacillus curvatus (0.5%), Lactobacillus paraplantarum (0.5%), Lactococcus garvieae (0.5%), and Pediococcus acidilactici (0.5%). As for highlights, Minas artisanal cheeses from Canastra exhibited 7 out of 10 LAB species detected in the study, whereas Caipira and Colonial cheeses were the only ones to harbor Lb. curvatus and Pd. acidilactici, respectively. Most of the isolates belonged to the Southeast region and were obtained from Minas artisanal type cheese (45.0%), being distributed per microregion as follows: Serro (n = 23), Cerrado (n = 2), Canastra (n = 22), Campo das Vertentes (n = 36), and Araxá (n = 16). Moreover, isolates presenting the best technological potential were obtained from Northeast region (27.73%): Coalho (n = 45), Coalho light (n = 9), and Manteiga (n = 7) cheeses; and from Center-West and Southeast regions, accounting for 17.7% and 9.6% of isolates belonging to Caipira (n = 39), Colonial (n = 12), and Serrano (n = 9) cheeses, respectively.

      Technological and Biopreservative Potential

      Lipolytic and proteolytic LAB were also able to grow in modified MRS broth with NaCl (4 and 6%), contributing to the technological process of cheese production. Therefore, these strains were chosen for further analyses, for a more in-depth characterization of their technological and biopreservative potential. A total of 220 LAB isolates were evaluated for their inhibitory activity against L. monocytogenes and S. aureus strains and the production of diacetyl, EPS, and bacteriocins. Figure 2 shows the main results obtained for diacetyl production, expressed as high (+++), moderate (++), or weak (+). For bacteriocin detection, no inhibition halos were observed after the heat treatment of CFS and the addition of proteolytic enzymes, which indicated the proteinaceous nature of the inhibitory substance.
      Figure thumbnail gr2
      Figure 2(A) Analysis of diacetyl formation by lactic acid bacteria (LAB) isolates, expressed as high (+++), medium (++), weak (+), and no production (−), as shown from left to right tubes, according to intensity of pinkish ring observed; (B) evaluation of exopolysaccharide production by LAB isolates presenting slimy and mucoid colonies and classified as high (+++), indicating a maximum filament stretching of polymer produced (>5 mm); and (C) positive result for bacteriocin production. Halo initially observed in ST [standard treatment: no enzymes added to cell-free supernatant (CFS)] plate indicating Listeria monocytogenes 68 (Lm 68) inhibition, which was no longer observed after treatment of CFS with proteolytic enzymes α-chymotrypsin type II from bovine pancreas (αQ), protease type XIV from Streptomyces griseus (Sg), trypsin (TRI), and proteinase K (PK), corroborating the proteic nature of the compound(s) synthesized by LAB isolate. Each quadrant (A1, C1, E1, G1, 2, 3, and 4) represents a different microorganism tested.
      Table 1 summarizes data obtained for the tests mentioned above, considering all species of LAB determined in this study. According to our results, 131 isolates (59.6%) were classified as strong (40.5%) and moderate (19.1%) diacetyl producers. Also, 28 isolates (12.73%) stood out as high EPS producers from sugar sources: sucrose (3.2%), fructose (2.3%), lactose (2.3%), and glucose (6%). Moreover, 94.1% and 95.9% of the LAB isolates presented inhibitory activity against pathogenic S. aureus and L. monocytogenes, respectively; however, only 27 LAB isolates (12.27%) exhibited positive results in the test performed for bacteriocin production, confirming the proteinaceous origin of the antimicrobial substance.
      Table 1Diacetyl (D) and exopolysaccharide (EPS) production by lactic acid bacteria (LAB) isolates identified at species level, expressed as high (+++), medium (++), and weak (+)
      For EPS assessment, different carbon sources were tested, including sucrose (Suc), fructose (Fru), lactose (Lac), and glucose (Glu). Data obtained for the inhibitory effect of LAB isolates observed against Staphylococcus aureus ATCC 19095 (S a +) and Listeria monocytogenes ATCC 7644 (L m +) and particularly for bacteriocinogenic LAB isolates (Bac+) are also shown. Results were expressed as number (n) of LAB isolates that presented the above-mentioned features.
      LAB identification at species level (number of isolates)D+++D++D+Suc+++Suc++Suc+Fru+++Fru++Fru+Lac+++Lac++Lac+Glu+++Glu++Glu+S a +L m +Bac+
      Lactobacillus paracasei (n = 20)112408910141014051120201
      Lactobacillus sp. (n = 41)17811082707260726382437386
      Lactobacillus plantarum (n = 105)392131521633255732557734429710014
      Lactobacillus lactis (n = 7)301122043043034772
      Lactobacillus rhamnosus (n = 5)400041022022013550
      Lactobacillus brevis (n = 36)151141112011217112171102035353
      Lactobacillus garvieae (n = 1)001010010010010110
      Lactobacillus paraplantarum (n = 1)001001010010001110
      Pediococcus acidilactici (n = 1)001001001001001111
      Pediococcus pentosaceus (n = 2)002002001002011220
      Lactobacillus curvatus (n = 1)001001000000000110
      Total (n = 220)894257755127552121552122116310720721127
      1 For EPS assessment, different carbon sources were tested, including sucrose (Suc), fructose (Fru), lactose (Lac), and glucose (Glu). Data obtained for the inhibitory effect of LAB isolates observed against Staphylococcus aureus ATCC 19095 (S a +) and Listeria monocytogenes ATCC 7644 (L m +) and particularly for bacteriocinogenic LAB isolates (Bac+) are also shown. Results were expressed as number (n) of LAB isolates that presented the above-mentioned features.
      Most of the isolates belonging to Lb. rhamnosus (80.0%), Lb. brevis (72.2%), and Lb. paracasei (65%) species stood out for showing moderate to high diacetyl formation. Same isolates of Lb. rhamnosus (80.0%) were also good to moderate EPS producers from sucrose. Despite its weak ability to form diacetyl, isolate 2QB481 (Lc. garvieae) was considered a good producer of EPS from all tested carbon sources; and isolate 1QB399 (Lb. paraplantarum) as a good EPS producer from fructose and lactose. Both strains (2QB481 and 1QB399) were recovered from Minas artisanal cheeses of Canastra microregion. Lactococcus lactis (28.6%) and Lb. plantarum (13.3%) comprised the most significant numbers of bacteriocin-producing isolates. Strains of Pd. acidilactici (2QB502), Pd. pentosaceus (2QB101 and 1QB416), and Lb. curvatus (2QB417) presented weak diacetyl formation and weak or no EPS production from sucrose, fructose, and lactose. Results obtained for bacteriocin analysis, including information regarding identification and origin (cheese type, city, region, and microregion for artisanal Minas cheese) of LAB isolates are shown in Table 2. The proteinaceous nature of the inhibitory substance(s) produced by LAB isolates against pathogens was confirmed when nontreated CFS led to the formation of inhibition halos, and CFS treated with proteolytic enzymes resulted in no inhibition halos. Overall, 27 LAB isolates were characterized as bacteriocin producers. In Figure 2, halo formation was indicated by a positive symbol (+), and the absence of inhibition halos was demonstrated by a negative symbol (−).
      Table 2Characterization of bacteriocin-producing (Bac+) lactic acid bacteria (LAB) isolates against Listeria monocytogenes ATCC 3968 (LM 3968), L. monocytogenes ATCC 3973 (LM 3973), Staphylococcus aureus FRI S6 (SA FRI S6), and S. aureus FRI 361 (SA FRI 361)
      Positive results (settled as “ok”) for bacteriocin production (Bac+) were described as following: halos initially observed in ST [standard treatment–no enzymes added to cell-free supernatant (CFS)] plates, indicating pathogen inhibition (+), which was no longer observed (−) after treatment of CFS with proteolytic enzymes α-chymotrypsin type II from bovine pancreas (αQ), protease type XIV from Streptomyces griseus (Sg), trypsin (TRI), and proteinase K (PK), corroborating the proteic nature of the compound(s) synthesized by LAB isolate. NT = nontreated, without enzymatic treatment.
      LAB species
      L. = Lactobacillus; P. = Pediococcus.
      CodeLM 3968LM 3973SA FRI S6SA FRI 361Cheese typeCity/stateRegion
      CE = center-west; NE = northeast; S = south; SE = southeast.
      Microregion
      NTαQSgTRIPKBac+NTαQSgTRIPKBac+NTαQSgTRIPKBac+NTαQSgTRIPKBac+
      L. brevis2QB422+ok+okCaipiraRibas do Rio Pardo/MSCE
      L. brevis2QB446+++okCaipiraAnhanduí/MSCE
      L. plantarum2QB350+okCaipiraJaraguari/MSCE
      L. plantarum3QB350+okCaipiraJaraguari/MSCE
      Lactobacillussp.1QB459+ok+ok+okCaipiraJaraguari/MSCE
      L. brevis1QB117++++++ok++CoalhoMarabá/PANE
      L. plantarum1QB147+okCoalhoCajazeiras/PBNE
      L. plantarum1QB113+okCoalhoCajazeiras/PBNE
      L. plantarum2QB147+okCoalhoCajazeiras/PBNE
      L. plantarum1QB127+okCoalhoBom Conselho/PENE
      L. paracasei1QB128+okCoalho lightTaipú/RNNE
      L. plantarum1QB314+ok+ok+ok+okColonialLacerdópolis/SCS
      L. plantarum3QB497+okColonialCarlos Barbosa/RSS
      P. acidilactici2QB502+ok+ok+okColonialCarlos Barbosa/RSS
      Lactobacillussp.3QB167+ok+ok+okManteigaCajazeiras/PBNE
      L. lactis1QB167+ok+ok+okManteigaCajazeiras/PBNE
      L. plantarum3QB216+++ok++Minas artesanalAraxá/MGSEAraxá
      L. plantarum1QB352+okMinas artesanalSão João del Rei/MGSECampo das Vertentes
      L. plantarum3QB361++++++ok++++++Minas artesanalSão João del Rei/MGSECampo das Vertentes
      L. plantarum1QB371+okMinas artesanalSão João del Rei/MGSECampo das Vertentes
      L. plantarum1QB77+ok+ok+okMinas artesanalSerro/MGSESerro
      L. plantarum2QB77+okMinas artesanalSerro/MGSESerro
      L. plantarum3QB98+okMinas artesanalSerro/MGSESerro
      Lactobacillussp.2QB383+ok++++okMinas artesanalSão João del Rei/MGSECampo das Vertentes
      Lactobacillussp.3QB398+okMinas artesanalMedeiros/MGSECanastra
      Lactobacillussp.2QB81+okMinas artesanalSerro/MGSESerro
      L. lactis1QB52+okMinas artesanalSerro/MGSESerro
      1 Positive results (settled as “ok”) for bacteriocin production (Bac+) were described as following: halos initially observed in ST [standard treatment–no enzymes added to cell-free supernatant (CFS)] plates, indicating pathogen inhibition (+), which was no longer observed (−) after treatment of CFS with proteolytic enzymes α-chymotrypsin type II from bovine pancreas (αQ), protease type XIV from Streptomyces griseus (Sg), trypsin (TRI), and proteinase K (PK), corroborating the proteic nature of the compound(s) synthesized by LAB isolate. NT = nontreated, without enzymatic treatment.
      2 L. = Lactobacillus; P. = Pediococcus.
      3 CE = center-west; NE = northeast; S = south; SE = southeast.
      According to our results, among this group of bacteriocinogenic strains (Table 2), only one isolate (1QB314) was able to inhibit the growth of all pathogens tested. Five isolates (2QB502, 1QB77, 3QB167, 1QB167, 1QB459) inhibited both strains of L. monocytogenes tested and S. aureus FRI S6. One isolate (2QB422) was able to inhibit both strains of L. monocytogenes. Isolate 2QB383 inhibited L. monocytogenes ATCC 3968 and S. aureus FRI S6. Three isolates (1QB352, 1QB371, and 1QB98) were only able to inhibit L. monocytogenes ATCC 3968, whereas 11 isolates (1QB147, 2QB77, 1QB113, 1QB128, 2QB147, 1QB127, 3QB361, 2QB81, 1QB117, 3QB350, and 3QB398) were merely able to inhibit L. monocytogenes ATCC 3973. Isolate 3QB216 only inhibited S. aureus FRI S6, whereas 4 isolates (1QB52, 2QB446, 2QB350, and 3QB497) merely inhibited S. aureus FRI 361. Most of the isolates were obtained from Minas artisanal cheeses (n = 11) from different microregions: Serro (n = 5), Campo das Vertentes (n = 4), Araxá (n = 1), and Canastra (n = 1), followed by Coalho (n = 6), Caipira (n = 5), Colonial (n = 3), and Manteiga (n = 2) cheeses and were identified as Lb. brevis (n = 3), Lb. paracasei (n = 1), Lb. plantarum (n = 15), Lc. lactis (n = 2), Pd. acidilactici (n = 1), and Lactobacillus sp. (n = 5). Data obtained for assessment of technological potential (moderate and high production of diacetyl, EPS, and bacteriocins) were submitted to a MCA to possibly correlate them with the source of LAB isolation (cheese type), as shown in Figure 3.
      Figure thumbnail gr3
      Figure 3Correspondence analysis map determined for lactic acid bacteria (LAB) isolated from Brazilian artisanal cheeses: Caipira, Coalho, Colonial, Manteiga, Minas artisanal (from Araxá, Campo das Vertentes, Canastra, Cerrado, and Serro microregions), and Serrano (represented by solid black squares). All cheeses were obtained from the 4 main regions of Brazil and their LAB features (represented by solid blue circles) were classified as moderate (++) or high (+++) diacetyl (D) and exopolysaccharide from fructose (F), lactose (L), sucrose (S), and glucose (G) producers; and also as positive (+) for bacteriocin (B) activity.
      According to outputs obtained from MCA, the first and the second dimension comprised 58.9% and 23.2%, respectively, and explained 82.1% of the total variance observed in the data set. Moreover, variables tested were significantly different (P < 0.05) among each other. A cluster of isolates from Manteiga, Colonial, and Coalho cheeses was observed around variable B (bacteriocin production). Isolates obtained from Minas artisanal (from Cerrado microregion) cheeses were clustered around variables S, F, and G, indicating high or moderate EPS production from sucrose, fructose, and glucose. Furthermore, isolates from Serrano and Minas artisanal cheeses from Canastra and Campo das Vertentes microregions were clustered around variable L, indicating high or moderate EPS production from lactose. Finally, isolates from Minas artisanal (from Araxá microregion), Coalho, and Caipira cheeses were clustered around variable D (moderate or high diacetyl production).

      Safety Evaluation

      In addition to data obtained for assessment of technological potential, further tests were performed to determine the presence of virulence factors in LAB isolates. Table 3 shows the results obtained for the antibiogram test using antimicrobial agents recommended by
      • CLSI
      Performance Standards for Antimicrobial Susceptibility Testing; Twenty-Second Informational Supplement. CLSI document M100–S22.
      . According to our data, most of the LAB isolates were resistant to ciprofloxacin (81.4%), gentamicin (94.6%), and vancomycin (97.3%) and all LAB isolates were resistant to streptomycin. In contrast, most of LAB isolates were sensitive to tetracycline (95.0%), erythromycin (93.2%), ceftazidime (80.5%), penicillin (76.4%), and clindamycin (71.8%). Furthermore, 40.9% of isolates were resistant to oxacillin, whereas 45.5% of them were resistant to the antibiotic.
      Table 3Antimicrobial susceptibility profile of lactic acid bacteria (LAB) isolated from Brazilian artisanal cheeses
      The LAB isolates were tested against the following antibiotics: streptomycin (30 µg; STR), vancomycin (30 µg; VAN), gentamicin (10 µg; GEN), ciprofloxacin (5 µg; CIP), oxacillin (1 µg; OXA), clindamycin (2 µg; CLI), penicillin (10 U; PEN), erythromycin (5 µg; ERY), tetracycline (30 µg; TET), and ceftazidime (30 µg; CAZ). Results were expressed as number (n) of LAB isolates sensitive (S), moderately sensitive (M), and resistant (R) to the above-mentioned antimicrobial agents.
      LAB species
      L. = Lactobacillus; P. = Pediococcus.
      Antibiotic
      GENPENCLITETVANCIPERYSTROXACAZ
      RMSRMSRMSRMSRMSRMSRMSRMSRMSRMS
      L. brevis (n = 36)313215611175111134342332113536242713614
      L. curvatus (n = 1)1111111111
      L. paracasei (n = 20)201315214191828332020719514
      L. paraplantarum (n = 1)1111111111
      L. plantarum (n = 105)1005152555191367105103296164199105385477395
      L. rhamnosus (n = 5)5555531452332
      Lactobacillus sp. (n = 41)401193035306354127364364115196131
      L. garvieae (n = 1)111111111
      L. lactis (n = 7)73224334773473234
      P. pentosaceus (n = 2)2111122222112
      P. acidilactici (n = 1)1111111111
      Total (n = 220)208364510214179132209036
      1 The LAB isolates were tested against the following antibiotics: streptomycin (30 µg; STR), vancomycin (30 µg; VAN), gentamicin (10 µg; GEN), ciprofloxacin (5 µg; CIP), oxacillin (1 µg; OXA), clindamycin (2 µg; CLI), penicillin (10 U; PEN), erythromycin (5 µg; ERY), tetracycline (30 µg; TET), and ceftazidime (30 µg; CAZ). Results were expressed as number (n) of LAB isolates sensitive (S), moderately sensitive (M), and resistant (R) to the above-mentioned antimicrobial agents.
      2 L. = Lactobacillus; P. = Pediococcus.
      Figure 4 shows the overall profile of antibiotic susceptibility obtained for LAB isolates. Results are expressed in terms of LAB species and resistance against 2 to 4, 5 to 7, and 8 to 10 antibiotics. Most of the isolates (53.2%) were resistant to less than 5 antibiotics, 43.2% to 5 to 7 antibiotics, and 3.6% to more than 8 antibiotics. Notably, only 3 isolates identified as Lc. lactis, one isolate corresponding to Lb. plantarum, and 4 isolates determined as Lb. brevis were resistant to more than 8 antibiotics. In the present study, only isolates that were resistant to less than 4 antibiotics were chosen for further analyses. Figure 5 shows the results obtained for correspondence analysis between LAB isolates considered resistant to the antibiotics (according to the antibiogram results) and their source of isolation. An association between Coalho (added with spices) and Minas artisanal (from Cerrado microregion) cheeses and resistance to penicillin was observed.
      Figure thumbnail gr4
      Figure 4Assessment of prevalence (expressed in percentage) of different species of lactic acid bacteria obtained in the present study resistant to 2 to 4, 5 to 7, or 8 to 10 antibiotics.
      Figure thumbnail gr5
      Figure 5Correspondence analysis map determined for lactic acid bacteria (LAB) isolated from Brazilian artisanal cheeses: Caipira, Coalho, Colonial, Manteiga, Minas artisanal (from Araxá, Campo das Vertentes, Canastra, Cerrado, Serro microregions), and Serrano (represented by solid black squares). All cheeses were obtained from the 4 main regions of the country and their LAB resistance against the following antibiotics (represented by solid blue circles), according to the disk diffusion antimicrobial susceptibility testing method: streptomycin (30 µg; STR), vancomycin (30 µg; VAN), gentamicin (10 µg; GEN), ciprofloxacin (5 µg; CIP), oxacillin (1 µg; OXA), clindamycin (2 µg; CLI), penicillin (10 U; PEN), erythromycin (5 µg; ERY), tetracycline (30 µg; TET), and ceftazidime (30 µg; CAZ).
      Moreover, LAB isolates obtained from Minas artisanal (from Araxá microregion) cheese clustered around the TET variable (resistance against tetracycline). On the other hand, LAB isolates from Minas artisanal (from Serro microregion) cheese grouped around the ERY variable, indicating a higher number of microorganisms resistant to erythromycin. Finally, LAB isolates from Serrano and Colonial cheeses clustered around variables CLI and CAZ (resistance against clindamycin and ceftazidime). Also, LAB isolates obtained from Caipira, Minas artisanal (from Canastra and Campo das Vertentes microregions), and Coalho light were grouped around variables OXA and CIP (resistance against oxacillin and ciprofloxacin, respectively). No LAB isolates presented positive results for hemolysis tested performed in blood agar so that all microorganisms were classified as γ-hemolytic, which is an important safety issue when the application in food formulations is intended.

      PCA

      Results obtained from tests performed to assess the technological potential (diacetyl, EPS, and bacteriocin production) of LAB isolates that were shown to be resistant to less than 4 antibiotics (n = 117) were then submitted to a PCA, as shown in Figure 6. The first 7 components comprised 95.5% of the total variance. Among them, PC1 and PC2 components represented 30.5 and 22.1% of the total variance, respectively. Three distinct groups of bacteria (namely groups A, B, and C) could be observed, and their significant features are also shown in Figure 6B. As for highlights, group C exhibited high (+++) EPS production from fructose and lactose; group A presented weak EPS production from fructose and lactose; group B encompassed microorganisms that did not produce EPS from both sugar sources but were good diacetyl producers.
      Figure thumbnail gr6
      Figure 6(A) Principal component analysis score plot of technological properties obtained from 117 lactic acid bacteria (LAB) isolates and formed groups (groups A, B, and C). (B) Resulting groups are shown according to microorganisms' phenotypic features regarding diacetyl formation (D) and exopolysaccharide production from fructose (Fru), lactose (Lac), sucrose (Suc), and glucose (Glu) as main carbon sources [both expressed as weak (+) or high (+++)]. Finally, n represents the number of LAB isolates that presented the above-mentioned characteristics.
      A positive correlation between variable high diacetyl formation (D+++) and weak EPS production from glucose and sucrose was observed, as well as between high EPS production from both sugar sources (Suc+++ and Glu+++) and weak diacetyl formation (D+). The number of bacteriocin-producing LAB isolates was higher in group A (n = 9), followed by group B (n = 4), and interestingly, these groups were shown to present, respectively, weak or no EPS production from lactose and fructose. A significant correlation between type cheese and groups was determined, as follows: group A was positively correlated with Minas artisanal (from Serro microregion) cheeses; group B with Minas artisanal (from Araxá, Campos das Vertentes, and Canastra microregions); and group C with Serrano and Minas artisanal cheeses from Cerrado microregion. In terms of isolate identity, Lc. lactis, Lb. curvatus, and Lc. garvieae were observed only in groups A, B, and C, respectively.
      In contrast, Lb. brevis, Lb. paracasei, Lb. plantarum, and Lb. rhamnosus were determined in all groups, indicating their properties vary according to source isolation (geographical region), also suggesting an intraspecies variability depending on cheese type from where they were obtained.

      DISCUSSION

      This study aimed to evaluate EPS production from different sugar sources, diacetyl formation in milk, bacteriocinogenic potential, and virulence factors of 220 LAB isolates belonging to genera Lactobacillus, Lactococcus, and Pediococcus, classified as nonstarter lactic acid bacteria in a previous study performed by our research group (unpublished data) due to their intrinsic resistance against salt and low pH values and ability to produce proteolytic and lipolytic enzymes in the extracellular medium. Lactic acid bacteria diversity in cheeses is related to several factors, such as breed, herd diet type, manufacturing process involving rudimentary techniques and autochthonous microbiota from raw milk, and processing environment, which profoundly contribute to differences found in terms of aroma, color, and flavor observed in artisanal cheeses produced in different regions of Brazil. The Lactobacillus genus has been intensively evaluated for pro-technological characteristics in artisanal Brazilian cheeses (
      • Cabral M.L.B.
      • de Lima M.dos S.F.
      • Fernandes G. A. de A.
      • da Costa E.F.
      • Porto A.L.F.
      • Cavalcanti M.T.H.
      Queijos artesanais: Fonte de bactérias ácido láticas selvagens para formulação de fermentos tradicionais.
      ;
      • Kamimura B.
      • Magnani M.
      • Luciano W.A.
      • Campagnollo F.B.
      • Pimentel T.C.
      • Alvarenga V.O.
      • Pelegrino B.O.
      • Cruz A.G.
      • Sant'Ana A.S.
      Brazilian artisanal cheeses: An overview of their characteristics, main types and regulatory aspects.
      ,
      • Kamimura B.A.
      • De Filippis F.
      • Sant'Ana A.S.
      • Ercolini D.
      Large-scale mapping of microbial diversity in artisanal Brazilian cheeses.
      ).
      One of the most important features of LAB is their ability to synthesize diacetyl (2,3-butanedione), responsible for aroma development in fermented foods, and other molecules (e.g., CO2, aldehyde, acetic acid, and so on) formed from citrate by monophosphate pentose pathway in heterofermentative bacteria. In this study, 131 (59.6%) LAB isolates were able to produce diacetyl from milk lactose, indicating their potential application as adjunct cultures in cheeses production. During cheesemaking, starter bacteria (normally homolactic) reduce milk pH due to acid, lactic buildup (produced from milk lactose). This first acidification step facilitates citrate transport from milk into LAB cells, using an enzyme known as citrate permease, and the molecule can be the precursor of aromatic compounds, such as diacetyl and aldehyde (
      • de Souza J.V.
      • Dias F.S.
      Protective, technological, and functional properties of select autochthonous lactic acid bacteria from goat dairy products.
      ). In reality, several studies carried out with LAB isolated from artisanal cheeses have demonstrated diacetyl production (
      • Taboada N.
      • Núñez M.
      • Medina R.
      • López Alzogaray M.S.
      Characterization and technological properties of lactic acid bacteria isolated from traditional Argentinean goat's milk products.
      ;
      • de Almeida Júnior, W.L.G.
      • Ferrari Í.S.
      • de Souza J.V.
      • da Silva C.D.A.
      • da Costa M.M.
      • Dias F.S.
      Characterization and evaluation of lactic acid bacteria isolated from goat milk.
      ;
      • Ferrari I. da S.
      • de Souza J.V.
      • Ramos C.L.
      • da Costa M.M.
      • Schwan R.F.
      • Dias F.S.
      Selection of autochthonous lactic acid bacteria from goat dairies and their addition to evaluate the inhibition of Salmonella typhi in artisanal cheese.
      ;
      • de Souza J.V.
      • Dias F.S.
      Protective, technological, and functional properties of select autochthonous lactic acid bacteria from goat dairy products.
      ;
      • Agostini C.
      • Eckert C.
      • Vincenzi A.
      • Machado B.L.
      • Jordon B.C.
      • Kipper J.P.
      • Dullius A.
      • Dullius C.H.
      • Lehn D.N.
      • Sperotto R.A.
      • Pozzobon A.
      • Granada C.E.
      • Maciel M.J.
      • Volken de Souza C.F.
      Characterization of technological and probiotic properties of indigenous Lactobacillus spp. from south Brazil.
      ). Nonetheless, the current study assessed a great variety of BAC, marketed in 4 main regions of the country, and indicated that Coalho, Caipira, and Minas (from Araxá microregion) cheeses, originating from Northeast, Center-West, and Southeast, were the primary sources of diacetyl-producing isolates (Figure 3).
      Another relevant aspect for selection of starter or adjunct cultures is their ability to produce EPS from different sugar sources, acting as emulsifiers, thickeners, stabilizers, or water-binding agents, essential features from an industrial point of view, due to an improvement on texture and rheology associated with this phenotype (
      • Sanalibaba P.
      • Cakmak G.A.
      Exopolysaccharides production by lactic acid bacteria.
      ). In the present study, 74 (33.6%), 64 (29.1%), 62 (28.2%), and 57 (25.9%) out of 220 LAB strains were able to use glucose, lactose, sucrose, and fructose, respectively, as the primary carbon source for good to high EPS production. This test can be visually observed as the development of slimy colonies (Figure 2). The evaluation of this phenotype is considered the primary screening method for the selection of high EPS-producing strains in bench-scale and relies on inoculation of plates containing appropriate solid culture medium supplemented with sugar sources to be studied. This technique has been widely reported in the literature, and glucose is considered the most efficient carbon source for EPS production, although different sugars can be used, leading to a considerable variability on EPS synthesis and composition (
      • Yuksekdag Z.N.
      • Aslim B.
      Influence of different carbon sources on exopolysaccharide production by Lactobacillus delbrueckii ssp. bulgaricus (B3, G12) and Streptococcus thermophilus (W22).
      ;
      • Malik A.
      • Radji M.
      • Kralj S.
      • Dijkhuizen L.
      Screening of lactic acid bacteria from Indonesia reveals glucansucrase and fructansucrase genes in two different Weissella confusa strains from soya.
      ;
      • Bennama R.
      • Fernández M.
      • Ladero V.
      • Alvarez M.A.
      • Rechidi-Sidhoum N.
      • Bensoltane A.
      Isolation of an exopolysaccharide-producing Streptococcus thermophilus from Algerian raw cow milk.
      ;
      • Ishola R.O.
      • Adebayo-Tayo B.C.
      Screening of lactic acid bacteria isolated from fermented food for bio-molecules production.
      ;
      • Paulo E.M.
      • Vasconcelos M.P.
      • Oliveira I.S.
      • Affe H.M.J.
      • Nascimento R.
      • Melo I.S.
      • Roque M.R.A.
      • Assis S.A.
      An alternative method for screening lactic acid bacteria for the production of exopolysaccharides with rapid confirmation.
      ;
      • Zeidan A.A.
      • Poulsen V.K.
      • Janzen T.
      • Buldo P.
      • Derkx P.M.F.
      • Øregaard G.
      • Neves A.R.
      Polysaccharide production by lactic acid bacteria: From genes to industrial applications.
      ;
      • Oleksy M.
      • Klewicka E.
      Exopolysaccharides produced by Lactobacillus sp.: Biosynthesis and applications.
      ). In our study, the significant prevalence of LAB (66.4%) exhibiting high EPS production from at least one sugar source indicates BAC can be considered valuable sources of autochthonous strains with the potential to be employed as adjunct cultures in the dairy industry, and as inoculum in the biopolymer industry.
      In the case of isolates that showed high or good EPS formation from lactose, they can be used alone or in combination with starter cultures for the production of dairy fermented products, improving rheology and texture, in addition to contributing to their functional properties. A number of studies regarding EPS (+)-producing LAB indicated improvement of aroma, texture, and consistency of cheeses, particularly low-fat cheeses (light), due to retention of water molecules during clot formation, reducing water activity (aw), and consequently, syneresis (
      • Schmid J.
      • Sieber V.
      • Rehm B.
      Bacterial exopolysaccharides: Biosynthesis pathways and engineering strategies.
      ;
      • Zhang L.
      • Li X.
      • Ren H.
      • Liu L.
      • Ma L.
      • Li M.
      • Bi W.
      Impact of using exopolysaccharides (EPS)-producing strain on qualities of half-fat cheddar cheese.
      ;
      • Ayyash M.
      • Abu-Jdayil B.
      • Hamed F.
      • Shaker R.
      Rheological, textural, microstructural and sensory impact of exopolysaccharide-producing Lactobacillus plantarum isolated from camel milk on low-fat akawi cheese.
      ;
      • Wang J.
      • Fang X.
      • Wu T.
      • Min W.
      • Yang Z.
      Exopolysaccharide producing Lactobacillus plantarum SKT109 as adjunct culture in Cheddar cheese production.
      ;
      • Berthold-Pluta A.M.
      • Pluta A.S.
      • Garbowska M.
      • Stasiak-Różańska L.
      Exopolysaccharide-producing lactic acid bacteria – Health-promoting properties and application in the dairy industry.
      ). The EPS production by these LAB isolates can also represent an alternative to increase efficiency and yield on cheese production, drawing industries attention to cheaper, more natural, and more sustainable biopolymers, which also have regional characteristics, indicating Serrano (South) and Minas artisanal cheeses from Canastra and Campo das Vertentes microregions (Southeast) as the primary sources of EPS(+)-producing LAB from lactose (Figure 3). In addition to these technological applications, EPS production has been associated with Lactobacillus sp. probiotic potential to be used in the formulation of fermented functional foods. The presence of EPS can increase residence time in host gastrointestinal tract; facilitate colon colonization; exert anticarcinogenic, antiulcer, and antiviral activity; reduce cholesterol levels; and thus, contribute positively to human health (
      • N'tcha C.
      • Haziz S.
      • Agbobatinkpo P.
      • Vieira-Dalodé G.
      • Boya B.
      • Claude Codjia J.T.
      • Kayodé P.A.
      • Baba-Moussa L.
      Probiotic properties of lactic acid bacteria isolated from a Beninese traditional Beer's ferment.
      ;
      • Zannini E.
      • Waters D.M.
      • Coffey A.
      • Arendt E.K.
      Production, properties, and industrial food application of lactic acid bacteria-derived exopolysaccharides.
      ;
      • Lynch K.M.
      • Zannini E.
      • Coffey A.
      • Arendt E.K.
      Lactic acid bacteria exopolysaccharides in foods and beverages: Isolation, properties, characterization, and health benefits.
      ).
      On the other hand, the use of microorganisms in the biopolymer industry, especially LAB, has been gaining prominence due to the advantages of controlling and optimizing fermentation conditions to increase production yield in a short time (
      • Chaisuwan W.
      • Jantanasakulwong K.
      • Wangtueai S.
      • Phimolsiripol Y.
      • Chaiyaso T.
      • Techapun C.
      • Phongthai S.
      • You S.G.
      • Regenstein J.M.
      • Seesuriyachan P.
      Microbial exopolysaccharides for immune enhancement: Fermentation, modifications and bioactivities.
      ). This approach represents an advantageous alternative to the current use of biopolymers produced from vegetable matrices and algae, whose production is more difficult to control (
      • Kanimozhi J.
      • Sivasubramanian V.
      • Achary A.
      • Vasanthi M.
      • Vinson S.P.
      • Sivashankar R.
      Bioprocessing of agrofood industrial wastes for the production of bacterial exopolysaccharide.
      ;
      • Barcelos M.C.S.
      • Vespermann K.A.C.
      • Pelissari F.M.
      • Molina G.
      Current status of biotechnological production and applications of microbial exopolysaccharides.
      ). For this reason, several studies emphasize the importance of diversifying the production of EPS by utilizing different sources of carbon and nitrogen and by adjusting fermentation conditions (e.g., inoculum age, pH, temperature, agitation, O2) to optimize the process production via the biotechnological route (
      • Rahbar Saadat Y.
      • Yari Khosroushahi A.
      • Pourghassem Gargari B.
      A comprehensive review of anticancer, immunomodulatory and health beneficial effects of the lactic acid bacteria exopolysaccharides.
      ;
      • Barcelos M.C.S.
      • Vespermann K.A.C.
      • Pelissari F.M.
      • Molina G.
      Current status of biotechnological production and applications of microbial exopolysaccharides.
      ). This approach involves the exploration of new species of bacteria and, consequently, the production of new biopolymers with different functions.
      Despite the high degree of purity of biopolymers produced by such fermentation processes, the costs associated with microbial production of polymers have attracted the market's attention to the use of cheaper sources of carbon in the composition of the fermentation medium, which currently represents 30% of the costs associated with the production of EPS (
      • Kanimozhi J.
      • Sivasubramanian V.
      • Achary A.
      • Vasanthi M.
      • Vinson S.P.
      • Sivashankar R.
      Bioprocessing of agrofood industrial wastes for the production of bacterial exopolysaccharide.
      ). Thus, the use of agro-industrial waste as an alternative carbon source has gained prominence, once they are considered as renewable, cheaper, natural, and rich in sugars (fructose, sucrose, and glucose), nitrogen, and vitamins (
      • Kanimozhi J.
      • Sivasubramanian V.
      • Achary A.
      • Vasanthi M.
      • Vinson S.P.
      • Sivashankar R.
      Bioprocessing of agrofood industrial wastes for the production of bacterial exopolysaccharide.
      ). Such organic compounds can be easily assimilated by microorganisms and transformed into biological products. Some of these waste resources include sugarcane molasses, sugarcane juice, coconut water, fruit juice, peels, and pomace of fruits and vegetables (
      • Özcan E.
      • Öner E.T.
      Microbial production of extracellular polysaccharides from biomass sources.
      ;
      • Kanimozhi J.
      • Sivasubramanian V.
      • Achary A.
      • Vasanthi M.
      • Vinson S.P.
      • Sivashankar R.
      Bioprocessing of agrofood industrial wastes for the production of bacterial exopolysaccharide.
      ;
      • Chaisuwan W.
      • Jantanasakulwong K.
      • Wangtueai S.
      • Phimolsiripol Y.
      • Chaiyaso T.
      • Techapun C.
      • Phongthai S.
      • You S.G.
      • Regenstein J.M.
      • Seesuriyachan P.
      Microbial exopolysaccharides for immune enhancement: Fermentation, modifications and bioactivities.
      ).
      In our study, 74 (33.6%), 62 (28.2%), and 57 (25.9%) out of the 220 LAB tested showed good potential for the formation of EPS from glucose, sucrose, and fructose, respectively. Most of these microorganisms belong to Lb. plantarum and Lb. brevis species. Thus, such strains can be applied in new research involving biotechnological uses of the above-mentioned low-cost substrates in EPS production, mostly in Brazil, whose economy is known to be agriculture based. In addition to contributing cost-effectiveness biopolymer production, the need for use and management of residual matter produced by agroindustry has been increasing over the years. This use has been increased, intending to improve sustainable development and reduce associated environmental problems (
      • Badel S.
      • Bernardi T.
      • Michaud P.
      New perspectives for lactobacilli exopolysaccharides.
      ;
      • Özcan E.
      • Öner E.T.
      Microbial production of extracellular polysaccharides from biomass sources.
      ).
      Moreover, BAC are a good source of LAB isolates capable of producing EPS, with a great range concerning the carbon source used. This diversification can affect the production of new biopolymers, with different chemical structures, composition, molecular weight, ramifications, and functional groups, which is highly associated with bioactivity (anticancer, antioxidant, antimicrobial, immunomodulators, probiotic, and prebiotic), as indicated in the literature (
      • Wang P.G.
      • Guo H.
      • Yi W.
      • Song J.K.
      Current understanding on biosynthesis of microbial polysaccharides.
      ;
      • Zannini E.
      • Waters D.M.
      • Coffey A.
      • Arendt E.K.
      Production, properties, and industrial food application of lactic acid bacteria-derived exopolysaccharides.
      ;
      • Rahbar Saadat Y.
      • Yari Khosroushahi A.
      • Pourghassem Gargari B.
      A comprehensive review of anticancer, immunomodulatory and health beneficial effects of the lactic acid bacteria exopolysaccharides.
      ;
      • Silva L.A.
      • Lopes Neto J.H.P.
      • Cardarelli H.R.
      Exopolysaccharides produced by Lactobacillus plantarum: Technological properties, biological activity, and potential application in the food industry.
      ;
      • Chaisuwan W.
      • Jantanasakulwong K.
      • Wangtueai S.
      • Phimolsiripol Y.
      • Chaiyaso T.
      • Techapun C.
      • Phongthai S.
      • You S.G.
      • Regenstein J.M.
      • Seesuriyachan P.
      Microbial exopolysaccharides for immune enhancement: Fermentation, modifications and bioactivities.
      ). Ultimately, this is another advantage of using LAB in the production of EPS due to their GRAS status. This feature facilitates the application of these biopolymers as natural and safe food ingredients, without requiring the removal of biomass after production (
      • Zannini E.
      • Waters D.M.
      • Coffey A.
      • Arendt E.K.
      Production, properties, and industrial food application of lactic acid bacteria-derived exopolysaccharides.
      ;
      • Silva L.A.
      • Lopes Neto J.H.P.
      • Cardarelli H.R.
      Exopolysaccharides produced by Lactobacillus plantarum: Technological properties, biological activity, and potential application in the food industry.
      ). Such a concept aims to comply with the strict requirements that the legislation imposes on the addition of new additives and materials in foods.
      Another vital factor to be considered is the production of active antimicrobials by LAB against pathogenic microorganisms, with emphasis on bacteriocins or bacteriocin-like substances. The lack of standardization for production of some artisanal cheeses in addition to deficiencies found during processing, such as cases of herd mastitis, poor hygiene during milking and manufacturing, and inadequacy in storage, outlet, and trading conditions, negatively affect the microbiological quality of the food product. Numerous studies reported the presence of S. aureus in Brazilian cheeses, with counts of up to 105 cfu/g, considered above the limit allowed by local legislation (<103 cfu/g;
      • Brant L.M.F.
      • Fonseca L.M.
      • Silva M.C.C.
      Avaliação da qualidade microbiológica do queijo-de-minas artesanal do Serro-MG.
      ;
      • Zaffari C.B.
      • Mello J.F.
      • da Costa M.
      Qualidade bacteriológica de queijos artesanais comercializados em estradas do litoral norte do Rio Grande do Sul, Brasil.
      ;
      • Kamimura B.
      • Magnani M.
      • Luciano W.A.
      • Campagnollo F.B.
      • Pimentel T.C.
      • Alvarenga V.O.
      • Pelegrino B.O.
      • Cruz A.G.
      • Sant'Ana A.S.
      Brazilian artisanal cheeses: An overview of their characteristics, main types and regulatory aspects.
      ;
      • Tavares A.B.
      • Cavalcanti E.A.N.L.D.
      • Timm C.D.
      • de Lima H.G.
      • Cereser N.D.
      Queijo Artesanal Produzido No Sul Do Rio Grande Do Sul: Avaliação Físico-Química, Microbiológica E Suscetibilidade a Antimicrobianos De Isolados De Staphylococcus Coagulase Positiva.
      ). These figures are alarming because, at such concentrations, there might be enterotoxin formation by S. aureus, representing a real health risk for consumers. According to the Brazilian Ministry of Health, 2,350 cases of foodborne diseases were reported in 2018, and S. aureus was the third most important pathogen, responsible for 9.4% of all cases (
      • Brazil/Ministry of Health
      Outbreaks of Foodborne Diseases in Brazil.
      ). The high prevalence of L. monocytogenes (1.4–6%) in semi-hard artisanal cheeses marketed in Brazil (
      • Silva M.C.
      • Hofer E.
      • Tibana A.
      Incidence of Listeria monocytogenes in cheese produced in Rio de Janeiro, Brazil.
      ;
      • Souza R.A.
      Incidência de Listeria monocytogenes em Queijo tipo Coalho artesanal comercializado a temperatura ambiente em Fortaleza.
      ;
      • Raimundo D.C.
      Listeria monocytogenes em queijo minas meia cura: Análise quantitativa, qualitativa e perfil molecular das cepas isoladas.
      ) is indeed worrisome for the most vulnerable population groups (expectant mothers, newborns, immunocompromised patients, and elders), for which mortality rate due to the pathogen is significantly higher (20–30%;
      • FAO/WHO (Food and Agriculture Organization/World Health Organization)
      Risk assessment of Listeria monocytogenes in ready-to-eat foods: Technical report. Microbiological Risk Assessment Series, no. 5.
      ;
      • McLauchlin J.
      • Mitchell R.T.
      • Smerdon W.J.
      • Jewell K.
      Listeria monocytogenes and listeriosis: A review of hazard characterization for use in microbiological risk assessment of foods.
      ). It is worth noting that national legislation stipulates the absence of L. monocytogens in dairy products.
      Against this backdrop, the current study demonstrated a high number of LAB isolates (93.36%) with antagonistic activity against L. monocytogenes and S. aureus, indicating a great antimicrobial potential of the tested LAB. This antagonistic effect was not very related to the production of bacteriocins because only 27 out of the 220 strains showed positive results in the production of compounds with proteinaceous nature. Thus, these findings are in agreement with those reported by other authors, who also attested that after neutralizing the pH of LAB supernatant, there was an absence or reduction in the inhibitory activity against indicator pathogens (
      • Pisano M.B.
      • Viale S.
      • Conti S.
      • Fadda M.E.
      • Deplano M.
      • Melis M.P.
      • Deiana M.
      • Cosentino S.
      Preliminary evaluation of probiotic properties of Lactobacillus strains isolated from Sardinian dairy products.
      ;
      • dos Santos K.M.O.
      • Vieira A.D.S.
      • Buriti F.C.A.
      • do Nascimento J.C.F.
      • de Melo M.E.S.
      • Bruno L.M.
      • de Fátima Borges M.
      • Rocha C.R.C.
      • de Souza Lopes A.C.
      • de Melo Franco B.D.G.
      • Todorov S.D.
      Artisanal Coalho cheeses as source of beneficial Lactobacillus plantarum and Lactobacillus rhamnosus strains.
      ;
      • Sornplang P.
      • Piyadeatsoontorn S.
      Probiotic isolates from unconventional sources: A review.
      ;
      • Ołdak A.
      • Zielińska D.
      • Rzepkowska A.
      • Kołozyn-Krajewska D.
      Comparison of antibacterial activity of Lactobacillus plantarum strains isolated from two different kinds of regional cheeses from Poland: Oscypek and Korycinski cheese.
      ;
      • Partovi R.
      • Gandomi H.
      • Akhondzadeh Basti A.
      Safety aspects of Lactobacillus plantarum strains isolated from siahmazgi cheese.
      ). Such behavior can be explained by other mechanisms of inhibition related to LAB in addition to bacteriocin production, such as competition for substrates and decreased pH levels by organic acid production (e.g., lactic, formic, propionic, and acetic acids;
      • Favaro L.
      • Barretto Penna A.L.
      • Todorov S.D.
      Bacteriocinogenic LAB from cheeses - Application in biopreservation?.
      ;
      • Ołdak A.
      • Zielińska D.
      • Łepecka A.
      • Długosz E.
      • Kołożyn-Krajewska D.
      Lactobacillus plantarum strains isolated from Polish regional cheeses exhibit anti-staphylococcal activity and selected probiotic properties.
      ). So, these data demonstrate that antagonistic activity shown against the indicator pathogens allows the application of studied LAB isolates as biopreservatives in the production of dairy foods, increasing their shelf life.
      The proteinaceous nature of the antimicrobial compounds (bacteriocin or bacteriocin-like substances) was confirmed for 27 isolates, with a variable inhibition spectrum. As the main highlights, isolates 1QB314, 2QB502, 1QB77, 3QB167, 1QB167, 1QB459, identified as Lb. plantarum, Pd. acidilactici, Lc. lactis, and Lactobacillus sp. (see Table 2) were able to inhibit at least 3 out of the 4 pathogenic strains tested. Bacteriocins production by LAB is particularly well known in traditional dairy and nondairy foods. In parallel, increasing interest in researchers and food industries for the finding of new types of biopreservative agents, especially those considered more natural and that also have geographical features, have been observed (
      • Vélez M.P.
      • Hermans K.
      • Verhoeven T.L.A.
      • Lebeer S.E.
      • Vanderleyden J.
      • De Keersmaecker S.C.J.
      Identification and characterization of starter lactic acid bacteria and probiotics from Columbian dairy products.
      ;
      • dos Santos K.M.O.
      • Vieira A.D.S.
      • Buriti F.C.A.
      • do Nascimento J.C.F.
      • de Melo M.E.S.
      • Bruno L.M.
      • de Fátima Borges M.
      • Rocha C.R.C.
      • de Souza Lopes A.C.
      • de Melo Franco B.D.G.
      • Todorov S.D.
      Artisanal Coalho cheeses as source of beneficial Lactobacillus plantarum and Lactobacillus rhamnosus strains.
      ;
      • Cabral M.L.B.
      • de Lima M.dos S.F.
      • Fernandes G. A. de A.
      • da Costa E.F.
      • Porto A.L.F.
      • Cavalcanti M.T.H.
      Queijos artesanais: Fonte de bactérias ácido láticas selvagens para formulação de fermentos tradicionais.
      ;
      • Handa S.
      • Sharma N.
      In vitro study of probiotic properties of Lactobacillus plantarum F22 isolated from chhang – A traditional fermented beverage of Himachal Pradesh, India.
      ;
      • N'tcha C.
      • Haziz S.
      • Agbobatinkpo P.
      • Vieira-Dalodé G.
      • Boya B.
      • Claude Codjia J.T.
      • Kayodé P.A.
      • Baba-Moussa L.
      Probiotic properties of lactic acid bacteria isolated from a Beninese traditional Beer's ferment.
      ;
      • de Souza J.V.
      • Dias F.S.
      Protective, technological, and functional properties of select autochthonous lactic acid bacteria from goat dairy products.
      ;
      • Agostini C.
      • Eckert C.
      • Vincenzi A.
      • Machado B.L.
      • Jordon B.C.
      • Kipper J.P.
      • Dullius A.
      • Dullius C.H.
      • Lehn D.N.
      • Sperotto R.A.
      • Pozzobon A.
      • Granada C.E.
      • Maciel M.J.
      • Volken de Souza C.F.
      Characterization of technological and probiotic properties of indigenous Lactobacillus spp. from south Brazil.
      ;
      • Samedi L.
      • Linton Charles A.
      Evaluation of technological and probiotic abilities of local lactic acid bacteria.
      ). In our study, Minas artisanal, Coalho, and Caipira cheeses (Table 2) stood out as good sources of bacteriocin-producing LAB, which could be possibly used in the formulation of food products and thus contribute to increase their microbiological safety and maintain the terroir status of these artisanal products (
      • Campagnollo F.B.
      • Gonzales-Barron U.
      • Pilão Cadavez V.A.
      • Sant'Ana A.S.
      • Schaffner D.W.
      Quantitative risk assessment of Listeria monocytogenes in traditional Minas cheeses: The cases of artisanal semi-hard and fresh soft cheeses.
      ). Moreover, the ability to produce bacteriocins or bacteriocin-like substances against foodborne pathogens has also been considered an essential criterium for the selection of potentially probiotic LAB. For the selection of probiotic LAB, candidate strains must be carefully evaluated regarding, among other factors, biosafety to guarantee consumers will not be exposed to risks after their ingestion.
      Evaluation of hemolysin presence (enzymes that cause erythrocytes lysis) and resistance to clinically used antibiotics are some of the virulence factors that need to be addressed for LAB application as biopreservatives or probiotics in foods, ensuring safety for human consumption. In this study, a high resistance rate of LAB against gentamicin, vancomycin, ciprofloxacin, and streptomycin was observed, which is in agreement with results obtained by other researches that also evaluated LAB obtained from artisanal products (
      • Rodríguez-Alonso P.
      • Fernández-Otero C.
      • Centeno J.A.
      • Garabal J.I.
      Antibiotic resistance in lactic acid bacteria and micrococcaceae/staphylococcaceae isolates from artisanal raw milk cheeses, and potential implications on cheese making.
      ;
      • Costa H.H.S.
      • Souza M.R.
      • Acúrcio L.B.
      • Cunha A.F.
      • Resende M.F.S.
      • Nunes Á.C.
      In vitro probiotic potential of lactic acid bacteria isolated from artisanal minas cheese from Serra da Canastra, MG.
      ;
      • Andrade C.R.G.
      • Souza M.R.
      • Penna C.F.A.M.
      • Acurcio L.B.
      • Sant'Anna F.M.
      • Castro R.D.
      • Oliveira D.L.S.
      Propriedades probióticas in vitro de Lactobacillus spp. isolados de queijos minas artesanais da Serra da Canastra - MG.
      ;
      • Agostini C.
      • Eckert C.
      • Vincenzi A.
      • Machado B.L.
      • Jordon B.C.
      • Kipper J.P.
      • Dullius A.
      • Dullius C.H.
      • Lehn D.N.
      • Sperotto R.A.
      • Pozzobon A.
      • Granada C.E.
      • Maciel M.J.
      • Volken de Souza C.F.
      Characterization of technological and probiotic properties of indigenous Lactobacillus spp. from south Brazil.
      ). Resistance against the antibiotics mentioned above, which belong to groups aminoglycosides (gentamicin and streptomycin), quinolones (ciprofloxacin), and glycopeptides (vancomycin), is considered natural or intrinsic for the genus Lactobacillus, although there is no risk for transfer of such resistance genes to other bacteria (
      • Charteris W.P.
      • Kelly H.P.M.
      • Morelli L.
      • Collins J.K.
      Antibiotic susceptibility of potentially probiotic Lactobacillus species.
      ;
      • Danielsen M.
      • Wind A.
      Susceptibility of Lactobacillus spp. to antimicrobial agents.
      ;
      • Herreros M.A.
      • Sandoval H.
      • González L.
      • Castro J.M.
      • Fresno J.M.
      • Tornadijo M.E.
      Antimicrobial activity and antibiotic resistance of lactic acid bacteria isolated from Armada cheese (a Spanish goats' milk cheese).
      ). The variable resistance to oxacillin (β-lactam) observed in the present study for LAB isolates (40.9%) does not represent a hazard itself because it has been extensively reported as an intrinsic feature for Lactobacillus sp. and is not related to plasmid transfer by conjugation (
      • Sant'Anna F.M.
      • Acurcio L.B.
      • Alvim L.B.
      • de Castro R.D.
      • de Oliveira L.G.
      • da Silva A.M.
      • Nunes Á.C.
      • Nicoli J.R.
      • Souza M.R.
      Assessment of the probiotic potential of lactic acid bacteria isolated from Minas artisanal cheese produced in the Campo das Vertentes region, Brazil.
      ). This resistance phenomenon can be related to the waterproof bacteria cell wall, or the production and action of β-lactamases (
      • Charteris W.P.
      • Kelly H.P.M.
      • Morelli L.
      • Collins J.K.
      Antibiotic susceptibility of potentially probiotic Lactobacillus species.
      ;
      • Costa H.H.S.
      • Souza M.R.
      • Acúrcio L.B.
      • Cunha A.F.
      • Resende M.F.S.
      • Nunes Á.C.
      In vitro probiotic potential of lactic acid bacteria isolated from artisanal minas cheese from Serra da Canastra, MG.
      ). These data suggest LAB isolates obtained in our work could help to restore the natural balance of intestinal microbiota in patients treated with these antibiotics.
      Conversely, the highest rates of LAB isolates presenting high or moderate sensitivity against antibiotics tested were observed for tetracycline, erythromycin, and ceftazidime (>80.5%), followed by clindamycin (from 71.8 to 76.4%), which is a desirable finding because resistance against these antimicrobials has been associated with horizontal gene transfer (
      • Testore G.P.
      • Sarrecchia C.
      • Zupi E.
      • Sordillo P.
      • Valli E.
      • Bove F.
      • Andreoni M.
      Antibiotic susceptibility of lactobacilli isolated from the cervix of healthy women.
      ;
      • Gevers D.
      • Danielsen M.
      • Huys G.
      • Swings J.
      Molecular characterization of tet(M) genes in Lactobacillus isolates from different types of fermented dry sausage.
      ). The main reason for the emergence of multiresistant bacteria is the indiscriminate use of antibiotics as growth promoters in livestock and for the treatment of diseases; in addition to that, the food chain is known as the main route of their transmission to humans (
      • Reis N.A.
      • Saraiva M.A.F.
      • Duarte E.A.A.
      • de Carvalho E.A.
      • Vieira B.B.
      • Evangelista-Barreto N.S.
      Probiotic properties of lactic acid bacteria isolated from human milk.
      ). Thus, susceptibility to antibiotics due to the transfer of resistance genes is a pivotal issue in candidate strains for use as probiotics or starters; otherwise, the microorganisms would act as reservoirs of these genes and transfer them to other bacteria in the host gastrointestinal tract (
      • Handa S.
      • Sharma N.
      In vitro study of probiotic properties of Lactobacillus plantarum F22 isolated from chhang – A traditional fermented beverage of Himachal Pradesh, India.
      ).
      In this regard, only LAB isolates (117/220) resistant to less than 4 antibiotics and with no risks of antibiotic-resistant genes transfer to other microorganisms were used for PCA. The results obtained from diacetyl, EPS, and bacteriocin assays were used as input values to run a PCA (Figure 6). The first (component 1) and the second (component 2) principal components were able to explain 30.5% and 22.1%, accounting for 52.6% of the total variance. The LAB strains were distributed in the factorial space and divided into 3 groups, labeled group A, group B, and group C. These 3 distinct groups were demonstrated according to the ability of LAB isolates (1) to use lactose and fructose and lead to low [Figure 6A (group A)] or high [Figure 6A (group C)] EPS production, indicated by the development of slimy and mucoid colonies (Figure 2B); (2) to form diacetyl from lactose; and (3) to produce bacteriocins or bacteriocin-like substances [Figure 6A (group B)]. High intraspecies variability was observed, indicating the influence of isolation source on the performance of LAB isolates. This tool was indeed useful for a rational selection of autochthonous LAB from artisanal cheeses obtained in different regions of Brazil, which were shown to present a high potential for use as adjunct cultures. These adjunct cultures would have the capability to improve texture, aroma, flavor, and viscosity parameters of fermented foods (inherent characteristics of cheese type from which they were isolated). In addition, these LAB strains also act as biopreservatives depending on industries' needs, especially for small manufacturers.

      CONCLUSIONS

      Data obtained in this study corroborate the potential of the Brazilian market for the application of endogenous LAB from local food products, as opposed to the current use of starter cultures commercialized by foreign companies (
      • Cabral M.L.B.
      • de Lima M.dos S.F.
      • Fernandes G. A. de A.
      • da Costa E.F.
      • Porto A.L.F.
      • Cavalcanti M.T.H.
      Queijos artesanais: Fonte de bactérias ácido láticas selvagens para formulação de fermentos tradicionais.
      ), boosting the formulation of products with organoleptic characteristics similar to those from where microorganisms were obtained. Thus, by the use of multivariate statistical tools, it was possible to select 117 out of 220 LAB isolates studied here. These isolates stood out due to the absence of hemolytic activity and their intrinsic resistance to a maximum of 4 different antibiotics, being considered as good candidates to enhance the development of adjunct cultures with balanced properties for the production of low-cost, high-quality, safe, and value-added Brazilian functional dairy products. The isolates considered as unsafe for food applications showed resistance to antimicrobials generally associated with horizontal gene transfer between bacteria, which may explain the association between specific resistance to these antibiotics and the origin of isolation. Finally, the present study is of particular importance because it is the first one to perform technological bioprospecting of microbiota from a wide variety of BAC traded in 4 main regions of the country, evidencing the high intraspecies variability in data presented, which is strongly related to the origin of isolation as demonstrated by the use of multivariate analysis.

      ACKNOWLEDGMENTS

      The authors acknowledge Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP; Brazil) for financial support (Grants #2015/25641-4, #2017/03899-5, and #2020/06519-1), Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, Grants #403865/2013-1, #302763/2014-7, and #305804/2017-0; Brazil). This study was financed, in part, by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior–Brasil (CAPES)–Finance Code 001. The authors have not stated any conflicts of interest.

      Supplementary Material

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